KEGG   Homo sapiens (human): 55253
Entry
55253             CDS       T01001                                 
Symbol
TYW1, RSAFD1, TYW1A, YPL207W
Name
(RefSeq) tRNA-yW synthesizing protein 1 homolog
  KO
K15449  tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hsa03016]
    55253 (TYW1)
Enzymes [BR:hsa01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.3  Oxo-acid-lyases
    4.1.3.44  tRNA 4-demethylwyosine synthase (AdoMet-dependent)
     55253 (TYW1)
Transfer RNA biogenesis [BR:hsa03016]
 Eukaryotic type
  tRNA modification factors
   Methyltransferases
    55253 (TYW1)
SSDB
Motif
Pfam: Flavodoxin_1 Wyosine_form Radical_SAM DUF3280
Other DBs
NCBI-GeneID: 55253
NCBI-ProteinID: NP_060734
OMIM: 611243
HGNC: 25598
Ensembl: ENSG00000198874
UniProt: Q9NV66
Position
7:66996833..67239514
AA seq 732 aa
MDPSADTWDLFSPLISLWINRFYIYLGFAVSISLWICVQIVIKTQGKNLQEKSVPKAAQD
LMTNGYVSLQEKDIFVSGVKIFYGSQTGTAKGFATVLAEAVTSLDLPVAIINLKEYDPDD
HLIEEVTSKNVCVFLVATYTDGLPTESAEWFCKWLEEASIDFRFGKTYLKGMRYAVFGLG
NSAYASHFNKVGKNVDKWLWMLGAHRVMSRGEGDCDVVKSKHGSIEADFRAWKTKFISQL
QALQKGERKKSCGGHCKKGKCESHQHGSEEREEGSHEQDELHHRDTEEEEPFESSSEEEF
GGEDHQSLNSIVDVEDLGKIMDHVKKEKREKEQQEEKSGLFRNMGRNEDGERRAMITPAL
REALTKQGYQLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMETTPSLACANKC
VFCWRHHTNPVGTEWRWKMDQPEMILKEAIENHQNMIKQFKGVPGVKAERFEEGMTVKHC
ALSLVGEPIMYPEINRFLKLLHQCKISSFLVTNAQFPAEIRNLEPVTQLYVSVDASTKDS
LKKIDRPLFKDFWQRFLDSLKALAVKQQRTVYRLTLVKAWNVDELQAYAQLVSLGNPDFI
EVKGVTYCGESSASSLTMAHVPWHEEVVQFVHELVDLIPEYEIACEHEHSNCLLIAHRKF
KIGGEWWTWIDYNRFQELIQEYEDSGGSKTFSAKDYMARTPHWALFGASERGFDPKDTRH
QRKNKSKAISGC
NT seq 2199 nt   +upstreamnt  +downstreamnt
atggatccttctgcggatacatgggacctcttctcacctttaatatcattatggataaac
aggttttacatttatttgggctttgctgttagcattagcctttggatttgtgtccagatt
gtcatcaagacgcagggcaagaacttacaggaaaaatctgttccaaaagcagctcaggat
ttgatgacaaatggttatgtctcccttcaagagaaagacatctttgtgtctggagtgaag
attttttatggttctcagactggaacagcgaagggattcgcaacagttcttgctgaagca
gttacatccctggatctgcctgtggccattattaatctaaaagaatatgatccagatgat
catctgatagaagaggtgactagtaaaaatgtctgtgtcttcctggttgcgacatacact
gacggcctaccaactgaaagtgcagagtggttctgcaaatggttagaggaagcatccatt
gattttcgatttggcaaaacttacctgaagggtatgagatatgcggtatttggcctggga
aattctgcctatgctagccacttcaacaaggttggcaaaaatgttgacaagtggctctgg
atgcttggcgcgcatcgtgtgatgagtcgaggggagggcgactgcgacgtggttaaaagc
aagcacggcagcattgaggccgacttcagagcatggaagaccaagttcatctcccagctg
caggcacttcagaaaggggagagaaagaagtcctgtggcggccactgcaagaaaggcaaa
tgtgaatctcaccaacatggctcagaggagagggaggaaggatctcatgagcaggatgaa
ttgcatcatagagacaccgaggaggaagaaccctttgagagctccagtgaagaagagttt
ggtggtgaggaccatcagagcctaaattccattgttgatgttgaagatttgggcaaaatt
atggatcatgtgaagaaagaaaagagagaaaaggaacagcaggaagagaagtctggtttg
ttcaggaacatggggaggaatgaagatggtgaaagaagagctatgataactcctgctctc
cgagaagcccttactaaacaaggttatcagttgattgggagccactcgggggtgaagctt
tgcaggtggacaaagtccatgctccgagggagaggaggttgttacaaacacacattctat
ggaattgagagccatcgctgcatggaaaccaccccgagcttggcgtgtgctaataaatgt
gtcttctgttggcggcaccacaccaaccccgtgggcactgagtggcggtggaagatggac
cagcctgaaatgatcttgaaggaagccattgaaaaccatcagaacatgattaagcagttt
aaaggagtaccgggcgtcaaagcagaacgctttgaagaaggaatgacggtaaagcactgt
gcattgtccctcgtgggagaaccaataatgtacccagagatcaacaggtttttgaagcta
ctccaccagtgtaaaatttccagcttcctggtcacaaacgcacaatttcctgcggaaatc
aggaacctcgagccggttactcagctgtatgtcagtgtggatgccagtaccaaagacagc
ctgaagaaaatcgaccgcccactcttcaaggatttctggcagagattccttgacagttta
aaagccttggcagtcaagcaacaacgaactgtctacagactgacgctcgtgaaagcatgg
aacgtggacgagctccaggcctacgcgcagctcgtgtccctggggaatcctgacttcatc
gaagtgaagggcgttacctactgcggagaaagttcagcaagcagtcttaccatggcccac
gtgccctggcatgaggaagtggtacagtttgtccacgagttggtggatctgatccccgaa
tatgaaattgcatgtgaacacgaacactctaattgcctcctgatagcacacagaaagttt
aaaattggtggtgaatggtggacatggatcgattataaccgcttccaggagctcatccag
gaatatgaagatagtggtggatcaaaaacgttcagcgcaaaggattatatggccagaact
cctcactgggcattatttggtgccagtgaaagaggctttgatcccaaggacacaagacat
cagagaaagaacaaatcaaaggctatttctggatgttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Disease (1)   
   OMIM (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (11)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (9)   
DNA sequence (26)   
   RefSeq(nuc) (10)   
   GenBank (8)   
   EMBL (8)   
Protein domain (4)   
   Pfam (4)   
All databases (66)   

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