KEGG   Homo sapiens (human): 59336
Entry
59336             CDS       T01001                                 
Symbol
PRDM13, CDIDHH, MU-MB-20.220, PCH17, PFM10
Name
(RefSeq) PR/SET domain 13
  KO
K24645  PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
hsa  Homo sapiens (human)
Disease
H00897  Pontocerebellar hypoplasia
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hsa03000]
    59336 (PRDM13)
Transcription factors [BR:hsa03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 PRDM
    59336 (PRDM13)
SSDB
Motif
Pfam: zf-C2H2 PRDM2_PR zf-H2C2_2 zf-C2H2_4 SET zf-BED zf-C2HE
Other DBs
NCBI-GeneID: 59336
NCBI-ProteinID: NP_067633
OMIM: 616741
HGNC: 13998
Ensembl: ENSG00000112238
UniProt: Q9H4Q3
Position
6:99606833..99615562
AA seq 707 aa
MHGAARAPATSVSADCCIPAGLRLGPVPGTFKLGKYLSDRREPGPKKKVRMVRGELVDES
GGSPLEWIGLIRAARNSQEQTLEAIADLPGGQIFYRALRDVQPGEELTVWYSNSLAQWFD
IPTTATPTHDEKGEERYICWYCWRTFRYPNSLKAHLRFHCVFSGGGGGAFLHHEHAARQG
AVPAADGLGLSPKPPAPDFAAPSQAGTLRPHPLGPPPVQACGAREGIKREASSAPSATSP
TPGKWGQPKKGKEQLDRALDMSGAARGQGHFLGIVGGSSAGVGSLAFYPGVRSAFKPAGL
ARAAAAAHGDPYREESSSKQGAGLALGRLLGGGRACGRPGSGENSAAGGAGHHHHHHAHH
HHHPKCLLAGDPPPPPPPGLPCSGALRGFPLLSVPPEEASAFKHVERAPPAAAALPGARY
AQLPPAPGLPLERCALPPLDPGGLKAYPGGECSHLPAVMPAFTVYNGELLYGSPATTAYY
PLKLHFGGLLKYPESISYFSGPAAAALSPAELGSLASIDREIAMHNQQLSEMAAGKGRGR
LDSGTLPPAVAAAGGTGGGGSGGSGAGKPKTGHLCLYCGKLYSRKYGLKIHMRTHTGYKP
LKCKVCLRPFGDPSNLNKHIRLHAEGNTPYRCEFCGKVLVRRRDLERHVKSRHPGQSLLA
KAGDGPGAEPGYPPEPGDPKSDDSDVDVCFTDDQSDPEVGGGGERDL
NT seq 2124 nt   +upstreamnt  +downstreamnt
atgcacggagccgccagagcgccagccaccagcgtgagtgccgactgctgcatcccggcc
ggcttgcgcctcggaccggtgcctggtaccttcaagctgggcaagtacctgtcagaccgc
agggagcccgggcctaagaaaaaggtgcgcatggtgagaggggagctggtggacgagtcg
gggggctcccctctggagtggatagggttaatccgggcagccagaaactcccaggaacag
actctggaagctattgcagacttacccggaggacagatcttctaccgagcattgcgagac
gtccagccaggggaggagctgacagtgtggtattctaactccttggctcagtggttcgac
atccccaccacagcgactccgactcacgacgagaaaggggaggagcgctacatctgctgg
tactgctggaggacgtttagataccccaacagccttaaggcacacctgcgtttccactgc
gtgttcagcggcggtggaggcggcgccttcctgcaccacgaacacgcggctcgccaaggc
gccgtcccagcggctgatggcctcggtctctccccaaaacccccggcgcccgatttcgcc
gcgccttcccaggcaggaactttgcgaccccaccccctgggcccgccaccagttcaggcc
tgcggtgcgcgggagggcatcaagcgcgaggcctcttccgcgccctcggccacctcgccg
accccaggcaagtgggggcagcccaagaagggcaaggagcagctggaccgtgccctggac
atgagcggagccgcccgaggacaagggcacttcctcggcatcgtgggcggctcctcggcg
ggggtcggcagcctggctttctaccccggcgtgcgctcagctttcaagcccgccggccta
gcgagggcggcggcggccgctcacggcgacccctaccgggaggagagcagcagcaagcaa
ggagccggcctcgctttgggcaggctgctgggcgggggccgggcgtgcgggcgccccggg
agcggggagaactcggcggcgggcggcgcgggtcaccaccatcaccaccacgcgcaccac
caccaccatcccaagtgcctgctcgctggggacccgccgccgccgccgccgcctggcctg
ccctgctctggggccctgcgcggcttccctctgctctccgtccccccggaagaggcgtcc
gccttcaagcacgtggagcgcgccccgcccgcagccgccgcgctgccaggagcgcgttat
gcgcagctgccccctgcgccggggttgcccctcgagcgctgcgcgctgccgcccctcgac
ccgggcggtctcaaagcctatccgggtggtgagtgcagccacctgcccgccgtcatgccg
gcctttacagtctacaacggggagctgctctacggctcaccggccaccaccgcttattac
ccgctcaaattgcacttcggcgggctgctgaagtatccggagtccatctcctacttcagc
gggcctgcagcggccgccctaagccccgccgagctggggtcgctggccagcatcgaccga
gagatcgccatgcacaatcagcagctgtccgagatggctgccgggaagggtcgcggacgc
ctggactcggggacgttgccaccggccgtcgcggcggcgggaggcaccgggggcggcggc
agcggaggcagcggcgcaggtaagcccaagaccggccacctgtgcctctactgtggcaag
ctgtactcgcgcaagtatgggctcaagatccacatgcggacgcacacgggctacaagcca
ctcaagtgcaaagtctgtctgcggcccttcggcgaccccagcaatctcaacaagcacatc
cggctgcacgccgagggcaatacgccctaccgctgcgagttctgcggcaaggtacttgtg
cgccgccgggacctggagcgacatgtcaagtcccgccaccctggccagagtctgctcgcc
aaagcgggcgacggcccgggtgccgagcccggctatcccccggagcctggggatcccaag
agcgacgacagtgacgtggacgtctgcttcacagacgaccagagcgaccccgaggttggg
ggcggcggggagcgcgacttgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Disease (4)   
   KEGG DISEASE (1)   
   OMIM (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (43)   

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