KEGG   Homo sapiens (human): 6656
Entry
6656              CDS       T01001                                 
Symbol
SOX1
Name
(RefSeq) SRY-box transcription factor 1
  KO
K09267  transcription factor SOX1/3/14/21 (SOX group B)
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hsa03000]
    6656 (SOX1)
Transcription factors [BR:hsa03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    6656 (SOX1)
SSDB
Motif
Pfam: SOXp HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 6656
NCBI-ProteinID: NP_005977
OMIM: 602148
HGNC: 11189
Ensembl: ENSG00000182968
UniProt: O00570
Position
13:112067149..112071706
AA seq 391 aa
MYSMMMETDLHSPGGAQAPTNLSGPAGAGGGGGGGGGGGGGGGAKANQDRVKRPMNAFMV
WSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKY
RPRRKTKTLLKKDKYSLAGGLLAAGAGGGGAAVAMGVGVGVGAAAVGQRLESPGGAAGGG
YAHVNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHPHHPHAHP
HNPQPMHRYDMGALQYSPISNSQGYMSASPSGYGGLPYGAAAAAAAAAGGAHQNSAVAAA
AAAAAASSGALGALGSLVKSEPSGSPPAPAHSRAPCPGDLREMISMYLPAGEGGDPAAAA
AAAAQSRLHSLPQHYQGAGAGVNGTVPLTHI
NT seq 1176 nt   +upstreamnt  +downstreamnt
atgtacagcatgatgatggagaccgacctgcactcgcccggcggcgcccaggcccccacg
aacctctcgggccccgccggggcgggcggcggcgggggcggaggcgggggcggcggcggc
ggcgggggcgccaaggccaaccaggaccgggtcaaacggcccatgaacgccttcatggtg
tggtcccgcgggcagcggcgcaagatggcccaggagaaccccaagatgcacaactcggag
atcagcaagcgcctgggggccgagtggaaggtcatgtccgaggccgagaagcggccgttc
atcgacgaggccaagcggctgcgcgcgctgcacatgaaggagcacccggattacaagtac
cggccgcgccgcaagaccaagacgctgctcaagaaggacaagtactcgctggccggcggg
ctcctggcggccggcgcgggtggcggcggcgcggctgtggccatgggcgtgggcgtgggc
gtgggcgcggcggccgtgggccagcgcctggagagcccaggcggcgcggcgggcggcggc
tacgcgcacgtcaacggctgggccaacggcgcctaccccggctcggtggcggcggcggcg
gcggccgcggccatgatgcaggaggcgcagctggcctacgggcagcacccgggcgcgggc
ggcgcgcacccgcacgcgcaccccgcgcacccgcacccgcaccacccgcacgcgcacccg
cacaacccgcagcccatgcaccgctacgacatgggcgcgctgcagtacagccccatctcc
aactcgcagggctacatgagcgcgtcgccctcgggctacggcggcctcccctacggcgcc
gcggccgccgccgccgccgctgcgggcggcgcgcaccagaactcggccgtggcggcggcg
gcggcggcggcggccgcgtcgtcgggcgccctgggcgcgctgggctctctggtgaagtcg
gagcccagcggcagcccgcccgccccagcgcactcgcgggcgccgtgccccggggacctg
cgcgagatgatcagcatgtacttgcccgccggcgaggggggcgacccggcggcggcagca
gcggccgcggcgcagagccggctgcactcgctgccgcagcactaccagggcgcgggcgcg
ggcgtgaacggcacggtgcccctgacgcacatctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system