KEGG   Acetivibrio saccincola: HVS_05000
Entry
HVS_05000         CDS       T05223                                 
Symbol
ygcB
Name
(GenBank) CRISPR-associated endonuclease/helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
hsc  Acetivibrio saccincola
Brite
KEGG Orthology (KO) [BR:hsc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hsc02048]
    HVS_05000 (ygcB)
Enzymes [BR:hsc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HVS_05000 (ygcB)
Prokaryotic defense system [BR:hsc02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    HVS_05000 (ygcB)
SSDB
Motif
Pfam: DEAD Helicase_C Cas3_HD ResIII AAA_22
Other DBs
NCBI-ProteinID: AUG56933
UniProt: A0A2K9EG96
Position
complement(1101567..1103834)
AA seq 755 aa
MYLAKPVKNEEGLYEYHVKGCIDIFNFEIKNKYSAFEKVLSKCNVSIDEFIENMRNAIAF
HDFGKLNNYFQDYMNRKADEKKLTGVKHFRHEVLSCLFLIEAFLKKENKNVFFPYDVLSV
LGHHKILTKDLKSFEREILWDDKWPDIPKEAMDLAVETAKSFGAEVFSEYKIQNKQIANK
VLKAIIEKSSREFEKDRKNLRVLYSLSKGLLHNCDWISSSTKNEYEKAYTLNTTPSVIEN
NLKNKLKSENKKYVKRRFHKLCAESKGSNIVIAPTGSGKTEAALMWALNLKPGKVIFLMP
TMVTSNSLYERLSTNYFPSEICGLTHSGAETYFFDKLRKNDEEETYDKFAMLHQKAFLPP
VMVSTVDQLLTTGFNTGFWTQKEYALLGSSVIFDEIHAYDSYTIGLITSTVKKILDFGGK
VLLMSATMPEFLKKHFLNLLGLKNAVVAEEFMDRVSNEWIYIDKDLPEIRENILEEISNG
KKTALIVNDIETAKKEYKFFSGKGIETLCLHSEFTLEDRNKKEKILTQKDGHPYQLIIST
QVIEVSLDISFDVMFSECAPIDSLVQRAGRCNRHGLIEYGRFYVFNPSEISLKWVYKRQQ
DIMEKTKDVLKNNTGKLSENDIASLVEEVYKDFDLYNEDYNSGAKIFDEILQKHEFFDLN
ILEEDEKLLTRKSDIIKIPIIPANQYKEKVEEHFIKKQYKLIPLYEVPVSINKFKKYIQR
KIIDNKFKLPLFSVDYNSDYGIDYEKEEETSFFSL
NT seq 2268 nt   +upstreamnt  +downstreamnt
ttgtatttggcaaaacctgttaaaaatgaagaaggcctatatgaataccacgttaagggc
tgtatagatatttttaattttgaaataaaaaataaatatagtgcctttgaaaaagtttta
tcaaaatgcaatgtaagtattgatgagtttatagaaaatatgagaaatgcaattgctttt
cacgactttggaaaactaaacaactactttcaagattatatgaatcgcaaagcggatgag
aaaaagcttacaggtgtaaaacatttcaggcacgaagtgctttcgtgcctttttttaata
gaagcatttttaaaaaaagaaaacaaaaatgtttttttcccctatgacgtattgtccgta
ttaggccaccacaaaattttaactaaagacttaaaaagctttgaaagggaaatattgtgg
gatgacaaatggcctgacattccaaaagaagccatggatttagccgttgaaacagctaaa
agttttggtgcagaagtttttagtgagtataaaattcaaaataaacaaattgcaaacaag
gtgctgaaagcaattattgaaaaatcatcccgggaatttgaaaaagacagaaaaaactta
agggtactgtattccctttcaaaagggcttttacacaattgtgactggatctcttcttca
acaaaaaatgagtatgagaaagcttataccctaaacaccactccatcagttattgaaaac
aacctaaaaaacaaactgaaatcagaaaataaaaaatatgtaaaaagacgttttcataaa
ttgtgtgcagaaagcaaaggaagcaatatagtaattgcccctactggttcgggaaaaaca
gaggcggctcttatgtgggctttaaatttaaaacccggtaaagtaatatttctaatgccc
acaatggttacttccaacagcctctatgaaagactttccaccaactacttcccttccgaa
atttgcgggctgacccattcaggtgcggaaacatacttttttgacaagctgcgtaaaaat
gatgaagaagaaacatacgataaattcgcaatgcttcatcaaaaagcatttttgccccct
gtgatggtttcaaccgttgaccagctactgacaacaggctttaatacaggtttttggact
caaaaagaatatgcccttttaggaagttcggtaatttttgatgaaatacacgcctatgac
agctacaccataggtcttataacctctaccgtaaagaaaatactggattttggcggtaaa
gtccttttaatgagcgccacaatgcccgaatttttaaaaaaacacttcttaaatttactc
ggtcttaaaaatgccgtagttgcagaagaatttatggacagggtcagcaatgaatggatt
tatattgacaaggatttaccggagatacgggaaaatatccttgaggaaatatccaacggc
aaaaaaactgcactaatagttaatgatattgaaacggctaaaaaagagtataaatttttt
tcagggaaaggaattgaaaccctttgccttcactcagaattcacattggaagacagaaac
aaaaaagaaaaaatactgacacaaaaagacggtcacccttatcagcttataatatccacc
caggtgatagaggtttcgctagatatcagttttgatgtaatgttttctgaatgtgccccc
attgacagccttgtacaaagggcaggacgctgcaaccgccatggcttaattgaatacggc
aggttttatgtatttaatccttcagaaataagtttaaaatgggtgtataaaaggcagcag
gacattatggaaaaaacaaaagacgttttaaaaaacaataccggtaaactctctgaaaat
gacattgcctctttagttgaagaggtttacaaagattttgacctttataatgaagactac
aactcaggggctaaaatatttgacgaaatactacaaaaacatgaattctttgacttaaac
attttagaagaagatgaaaaacttctgacaagaaaaagcgatattattaaaatacctatt
attccagcaaatcagtataaagaaaaagttgaagagcattttattaaaaagcaatacaaa
cttataccactttatgaagttcccgtgtctataaataagtttaaaaaatatattcaaaga
aaaataatagataataagttcaagcttcccctcttttccgttgattacaacagcgattat
ggcattgattatgaaaaggaagaagaaacttcattttttagtctatag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (33)   

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