KEGG   Herbinix luporum: SD1D_0818
Entry
SD1D_0818         CDS       T04072                                 
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine-D-glutamate ligase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
hsd  Herbinix luporum
Pathway
hsd00470  D-Amino acid metabolism
hsd00550  Peptidoglycan biosynthesis
hsd01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:hsd00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    SD1D_0818 (murD)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    SD1D_0818 (murD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:hsd01011]
    SD1D_0818 (murD)
Enzymes [BR:hsd01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     SD1D_0818 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:hsd01011]
 Precursor biosynthesis
  Amino acid ligase
   SD1D_0818 (murD)
SSDB
Motif
Pfam: Mur_ligase_M MurD-like_N Mur_ligase_C NAD_binding_7 AlaDh_PNT_C 2-Hacid_dh_C NAD_binding_8 XdhC_C
Other DBs
NCBI-ProteinID: CUH92366
UniProt: A0A0K8J3Y7
Position
I:886278..887636
AA seq 452 aa
MKLKDKKVLVFGAGKSGISAARLLQKLEAYVVLYDGKKDVDTGTFKDKIDTSKNWEAYFG
EFPMDKLDQIDLMIISPGIAIDHPFVEAVKEKAIPIWGEIELAYRHSKGKIIAVTGTNGK
TTTTSLIGEIMNTYFKQVFVVGNIGNPYTDIALDTTEDSVTIIELSSFQLETIHEFCPDV
SAILNITPDHLNRHHTMENYINLKKSIAKNQSIKNLCVLNYEDVHTRKIGNELDTRIVYF
SSETKLDNGLYLDGDDIIYSKEEIKEKICNVNELQILGKHSYENVMAAVAVAIEMGIPMD
LIYQAIRSFKAVEHRIEYVDTINGVSYYNDSKGTNPDASIKAVMAMKKPTILIGGGYDKG
SSFDEWILSFKGKVKTLVLMGETKEKIAATAKKYNFNNIIMVEDLKEAVLVSAREAKEGD
VVLLSPACASWGMFDNYEQRGRMFKKYVKELL
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgaagcttaaggataagaaggttctggtatttggtgcaggcaaaagcggaatatcagca
gcaagactgttacaaaaacttgaagcatatgttgtattatatgacggtaagaaggatgtt
gataccggtacctttaaggataaaatagatacaagtaagaactgggaagcttatttcgga
gaatttcccatggataaattagatcagattgacttaatgataataagccccggtatagcc
atagatcatccttttgtggaggctgtaaaagaaaaagctatacccatatggggagaaatt
gaattggcttaccgccattctaagggaaaaattatagcagttacaggaacaaacggtaaa
accaccactacttctttaataggagaaataatgaatacatattttaagcaggtttttgtg
gtgggtaatataggtaatccctatacagatatcgccctagataccactgaggattctgta
actataattgagcttagtagttttcaattagaaactatccatgagttttgcccagatgta
agtgctatattaaatataacaccggatcatctaaacaggcatcataccatggaaaattat
ataaatcttaaaaaaagcatagcaaaaaaccaaagtataaaaaatttatgtgtccttaat
tatgaggatgtccatacccgtaagataggtaatgagctagatacaaggattgtatatttt
tccagtgaaactaagctggataatggactatacttagatggggatgacataatatatagt
aaagaagaaataaaagaaaaaatatgcaatgtaaatgaacttcaaattttaggaaaacac
tcatatgaaaatgttatggcagctgtggcagtagccatagagatgggaattcccatggac
cttatttaccaggctataagatcctttaaggcagtagaacataggatagaatatgttgat
actataaatggtgtaagttattataacgactctaaaggtaccaaccccgatgcttcaatt
aaagcagttatggccatgaaaaaacctaccatactaattgggggaggctatgataaaggc
tcatcctttgatgaatggatcttgtcttttaagggtaaggtaaaaaccttggtactgatg
ggagagaccaaggaaaaaattgctgctacagcaaaaaaatataactttaataatattatt
atggttgaagacctaaaagaagcagtactggtaagtgccagggaggctaaggaaggtgac
gtggtacttttgtctcctgcctgtgccagctggggcatgttcgataattacgaacagcgt
ggaagaatgtttaagaaatatgtaaaagaattgttgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (48)   

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