KEGG   Herbaspirillum seropedicae SmR1: Hsero_0129
Entry
Hsero_0129        CDS       T01268                                 
Symbol
rplF
Name
(GenBank) 50S ribosomal subunit L6 protein
  KO
K02933  large subunit ribosomal protein L6
Organism
hse  Herbaspirillum seropedicae SmR1
Pathway
hse03010  Ribosome
Brite
KEGG Orthology (KO) [BR:hse00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    Hsero_0129 (rplF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:hse03011]
    Hsero_0129 (rplF)
Ribosome [BR:hse03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Large subunit
    Hsero_0129 (rplF)
  Bacteria
    Hsero_0129 (rplF)
  Archaea
    Hsero_0129 (rplF)
SSDB
Motif
Pfam: Ribosomal_L6
Other DBs
NCBI-ProteinID: ADJ61655
UniProt: D8IUT6
Position
140475..141008
AA seq 177 aa
MSRVGKMPVALPSGAEATITAEQITVKGPLGSLTQPLTKKVKVVNNNGSLSFEVADDSRE
ANAMSGTLRALVNNMVNGVTKGFEKKLNLVGVGFRAQAQGDKLNLSLGFSHPIVHQMPAG
IKVETPTQTEILIKGIDRQVVGQVAAEIRAYREPEPYKGKGVRYADEVVTLKETKKK
NT seq 534 nt   +upstreamnt  +downstreamnt
atgtctcgtgtaggtaaaatgcctgttgcactgccgagtggcgcggaagcgaccatcact
gcagagcaaatcaccgtcaagggcccgctgggctccttgacccaaccgctgaccaagaag
gtcaaggtggtcaacaacaatggctcgctgagcttcgaagtggctgatgacagccgcgaa
gccaacgcgatgtcgggcaccctgcgtgctctggtcaacaacatggtcaacggcgtcacc
aagggcttcgaaaagaagctgaacctggttggcgtgggtttccgtgcacaagcacaaggc
gacaagctgaacctgtcgctgggcttctcgcaccccatcgttcaccagatgcccgctggc
atcaaggttgagaccccgacccagaccgaaatcctgatcaagggtatcgatcgccaggtg
gttggccaggtcgccgctgaaattcgcgcgtaccgcgaacccgagccctacaagggcaag
ggtgtgcgctacgctgacgaagtggtgacgctcaaagaaaccaagaagaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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