KEGG   Halobacterium salinarum R1: OE_5335R
Entry
OE_5335R          CDS       T00662                                 
Name
(GenBank) homolog to nuclease subunit B
  KO
K16899  ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
Organism
hsl  Halobacterium salinarum R1
Brite
KEGG Orthology (KO) [BR:hsl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hsl03400]
    OE_5335R
Enzymes [BR:hsl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     OE_5335R
DNA repair and recombination proteins [BR:hsl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     OE_5335R
SSDB
Motif
Pfam: PDDEXK_1 Apolipoprotein
Other DBs
NCBI-ProteinID: CAP15641
UniProt: B0RA37
Position
PHS3:complement(207340..210528)
AA seq 1062 aa
MNNTLLTGSQHSRLEQVAFERADQMADDSLGSVLYITRNDARRSMVEDSWAASHDPLRLR
VETLDAVVRQWHEDLQGPVQPLSGQLNRRLAEYALDGMTAKTDGALAGEPASAALADSFS
SRFSLFDDAGVGTADALAAEFEGSALDDRIATPTVDAYRHYRDLHGDYVDEWVCTRGEMF
DAVATAEQSLSVLSPELDVVVLSGYHEFRPVERRLIERIVDELSMIALLPLHQDGRSGVD
TVAEDALEVYEALDFEKVELEPANESGRAFGTITESLYRPDPDTAPVPDGLRWRELPTPE
REIRFVARELRTELANGRDPDDLAVVAPGTEAYSGYVEDTFDTFDIPHVTTAASQLNQTF
AGSVVHDLLNLAEPDPRAEDLTSLLANPLVDIVDTDQANAVTAAARRRDTVSVSPLLDDV
DDEVASLVEELLATLEPLRTDDIEDATETLRRLMDDRFDLEAATEDYASGAEQAVEQRAY
DLVDEVLSSFESLAAVNSDLSPLALFTRAFDGVAIRVPQRAAGGHVEVMGLLDARMRSFE
KVFLVGLTSEHFPVTPERPAFFEEMTDADPRFDTGDERLRGRYLFATLLANVDELTITTP
ETGDDESAVVRSPVLDELQRVTGIEPEDGVDDRVGSREDLQRRVAATADRRAAVSHAGDR
GDLSPEQTKRTDRGLHCADNRGTAGLSEHDGVLEPETVDEVYPPSEREPYSASRIERYVE
CGFKFYADEVLGIEDPDDIEVVPTPLETGSYVHDVLERFFADLQDETEDGVDLTEFDRHD
LATHLREIAVEELQDTDFEYDGLFYERWKAELFAGLGDGESVPYEAGSKPHDAPEQGLFA
TFLDNELSRDSAGRPHLFEAPFGEGLPDSDAGPFTVERPDGSTVSIRGYIDRVDVSRDGE
QPTLTLYDYKTGRAPYMTKTTGGTKFQLPIYLLAAAEVVDGDLFEQGSLSATYYQLRPPN
DLKVPRGLESKFDSEVDLRRFLNNVVPEWLGQIDEAIGKGRFHTTVLSARGANCRYCDYR
RACDVRHHRKREFVDEVHEDDAAYVPIRVRDDEDIETVMNDD
NT seq 3189 nt   +upstreamnt  +downstreamnt
atgaataatacgcttttaactggttcccaacattcacgtttggaacaagttgcttttgaa
cgggcggaccagatggctgatgattctcttggctctgtcctatatataacgcggaacgac
gctcgccggagtatggtcgaggacagctgggccgcgtcgcacgacccactccgtcttcgt
gttgagacgctcgatgcggtcgttcgacagtggcacgaagatctccagggcccggtccaa
cccctctccggacagttgaatcgccggctcgcggagtacgcgcttgacggaatgacagcc
aaaacagatggcgctctcgccggcgaacctgcctcggctgctctcgcggattcgtttagt
agtcgcttctcactcttcgatgacgccggcgttgggactgccgacgcgctcgcagcggaa
ttcgaaggctccgctcttgatgaccgtattgcgacacccactgtcgacgcgtaccgacac
taccgggacctccacggcgactacgtcgacgagtgggtctgtacccggggagagatgttc
gacgccgtggcgacggcggagcagtcactctcggtcctctctccggaactggatgtcgtc
gtcctctcggggtatcacgagttccgtcccgtcgaacgccgcctcatcgaacgcatcgtc
gacgaactttcgatgatcgcgttgctgccgctccaccaggatgggcgaagcggagtcgac
actgttgcggaggacgccttggaggtctacgaagcactcgactttgagaaagtagaactc
gagcccgccaacgagtccgggcgggccttcggtacgatcactgagtcactctaccgcccg
gatcctgacaccgcccctgttccggacggcctccggtggcgggaactcccgacgcccgaa
cgcgagattcgcttcgtcgctcgcgagctccggactgagttggctaatggtcgcgatccc
gacgacctggctgtcgtcgccccagggacggaggcctattcggggtacgtcgaggacacg
ttcgacacgttcgacattccccacgtcacgacagccgcatcacagctgaaccagacgttt
gcagggagcgtcgttcatgatctgctgaacctggccgaacctgacccgcgtgctgaagat
ctcacatccttgttggcgaatccgctggtcgacatcgtcgacaccgaccaggccaacgcc
gtcacggcagctgctcgccggcgcgacaccgtttctgtgtcgcccctgctcgacgacgtc
gacgacgaggtcgcgtcactggtcgaagagctgctggccacgctggagcccctccgaacg
gacgacatcgaggacgcaaccgagacgctccgacggctgatggacgaccgcttcgacttg
gaggcggcgacagaggactacgccagcggcgccgagcaagccgtcgaacagcgggcctac
gacctcgtggacgaggtgctgtcctcgttcgagtcgctggcggcggtcaatagcgatctt
tccccgttggcactgttcacccgtgcgttcgacggtgtggcgatccgggttccgcagcgc
gccgccggtggtcacgtcgaagtgatggggttgctcgacgcccggatgcgttcgttcgag
aaggtgttcctcgtgggcctgacgagcgagcacttcccggtgacgccggagcgaccggcc
ttcttcgaggagatgaccgacgccgatccgcgcttcgacactggcgacgagcgcctccgt
ggccgctatctcttcgcgacgctcctcgcgaacgtcgacgagctcacgatcaccacaccg
gagacaggcgacgacgaatccgccgtcgtccggtcaccggtccttgacgaactccagcgc
gtgaccggtatcgaacccgaggatggcgtcgacgaccgcgtgggctcccgcgaagacctc
cagcggcgcgtcgctgcaacggccgaccggcgtgcggcagtcagccacgccggcgaccga
ggtgacctctcccccgagcagaccaagcgcacggatcgaggactccactgtgcggacaac
aggggaacggctggcctctccgaacacgatggcgtgttagaacccgagacagtcgatgag
gtatacccgccgtcggagcgggaaccctacagcgcgagtcgaattgagcgatacgtcgag
tgtgggttcaagttctacgctgacgaagtactcggaatcgaggaccccgacgatatcgag
gtcgtccctacgcctctcgaaactggatcgtacgtccacgacgtcctcgaacggttcttc
gcggatctacaagacgaaaccgaagacggtgtcgatctcaccgagttcgatcggcacgac
ctagcgacgcaccttcgcgagattgccgtcgaagaactccaagacactgacttcgagtac
gacgggctgttctacgagcggtggaaggcggagctgttcgcaggtctcggtgacggcgag
agcgtcccgtacgaggctggaagcaaacctcacgacgcaccggaacaggggttgttcgcc
accttcctcgacaacgaactctcccgagacagcgccggccgcccacacctattcgaggcc
ccgttcggcgaggggcttcccgactcggatgctgggccgttcacggttgagcgaccggac
ggctcgactgtctcgattcgtgggtacatcgaccgcgttgacgtgagccgggacggtgag
caaccgacgctcacgctgtacgactacaagactggtcgagcaccgtatatgacgaagacg
accggcggcacgaagttccagctccccatctatctactcgctgctgccgaggtcgtcgac
ggtgacctattcgagcagggctcgctctcagcgacgtactaccaactgcgaccacccaac
gacctcaaggttccacgcgggctcgaatcgaagttcgattcagaggtcgaccttcgtcgc
ttcctgaacaacgttgttccggagtggctgggccaaattgacgaagcgatcggcaaggga
cggttccatacgacggtcctgtcggcccgtggtgcgaactgccgatactgtgactaccga
cgggcgtgcgatgtccgccaccaccgcaagcgggagttcgtcgacgaggttcacgaggac
gacgctgcgtacgttccgatccgtgttcgcgacgacgaggacatcgagacggtgatgaac
gatgactga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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