KEGG   Harpegnathos saltator (Jerdon's jumping ant): 105192160
Entry
105192160         CDS       T03918                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
hst  Harpegnathos saltator (Jerdon's jumping ant)
Pathway
hst03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hst00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105192160
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hst03019]
    105192160
Messenger RNA biogenesis [BR:hst03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105192160
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     105192160
SSDB
Motif
Pfam: LSM DUF3868
Other DBs
NCBI-GeneID: 105192160
NCBI-ProteinID: XP_011154393
UniProt: E2B862
Position
Unknown
AA seq 134 aa
MNMVPGTASLLEELDKKLMVLLRDGRTLIGYLRSVDQFANIVLHRTIERIHVGKEYGDIP
RGIFIVRGENVVLLGEIDLEKEKVLPLTQVTVDDILDAQRREQELKQDQKRLRNKALKER
GLSYMPDLNHDDMF
NT seq 405 nt   +upstreamnt  +downstreamnt
atgaatatggtaccgggaacagcgtcgttactcgaagaactcgacaaaaaacttatggtt
ttattgagagatggcaggaccttaattggttatcttagaagtgtagaccaatttgctaat
attgtattacaccgtactattgaaaggattcatgttggcaaggaatatggtgatattcca
agaggtatattcatagtaagaggtgaaaatgttgtgctcttgggagaaatagacttagaa
aaagaaaaagtcttgcccttaacacaagtgacagtggatgatattctggatgcccaaaga
cgtgaacaagaattgaaacaagaccagaaacgattgaggaataaagctctgaaagaacgt
ggcctttcatatatgcctgatctaaatcacgatgatatgttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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