KEGG   Hymenobacter swuensis: Hsw_4238
Entry
Hsw_4238          CDS       T03055                                 
Name
(GenBank) isoleucyl-tRNA synthetase
  KO
K01870  isoleucyl-tRNA synthetase [EC:6.1.1.5]
Organism
hsw  Hymenobacter swuensis
Pathway
hsw00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:hsw00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Hsw_4238
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:hsw01007]
    Hsw_4238
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hsw03016]
    Hsw_4238
Enzymes [BR:hsw01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.5  isoleucine---tRNA ligase
     Hsw_4238
Amino acid related enzymes [BR:hsw01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   Hsw_4238
Transfer RNA biogenesis [BR:hsw03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    Hsw_4238
 Prokaryotic type
   Other AARSs
    Hsw_4238
SSDB
Motif
Pfam: tRNA-synt_1 DUF5915 Anticodon_1 tRNA-synt_1g tRNA-synt_1e
Other DBs
NCBI-ProteinID: AHJ99833
UniProt: W8F4C9
Position
4820171..4823713
AA seq 1180 aa
MLRQAQHDVLIVTTTSKEMNYPEFKQPLNYGQVGTDILAWWKQNGIFEKSVSTREGQPTF
VFYEGPPSANGAPGIHHVMARTVKDIFCRYQTLLGKQVHRKGGWDTHGLPIELQVEKELG
ITKEDIGKKISIEDYNQRCRETVMRFKAQWDDLTEKMGYWVDLDDPYITFEPEYIESCWA
LLKKLYDKGLLYKGYTIQPYSPAAGTGLSSHELNQPGTYRDVKDTTVVAQFKVKRDEKSE
PLFGNVQLDEVPLAALYGDNASEPDVYILAWTTTPWTLPANTGLAVGKNIPYVLVSTFNP
YTYAPIRVVLAEALVGKYFSEKGKEASFEDFKPGDKVLPWRIENTFKGADLVGINYERLF
GQNKGYPAFEGEENAFRVINGDFVTTEDGTGIVHISPTFGADDFRAAQLAGVPALLVADD
EGKLGPIVDRTGRYVAQMGEFGGRWVKNYDGHDESDADYKTLDESIAIRMKGDGTAFKVE
KYEHTYPHCWRTDKPVLYYPLDSWFIKTTAVKDRLIELNKTINWQPASTGTGRFGNWLEN
LVDWNLSRSRYWGTPLPIWRTQDGSEEICIGSIEQLNAEIEKAVAAEVMTHNPYQLVDGN
WVMANGSTDQTAKIDLHRPYVDDIFLVSPSGQPMYRETDLIDVWFDSGAMPYAQWHYPIE
NEGQFQKNFPADFIAEGVDQTRGWFFTLHALAVMLEDSVAYKNVMANGLVLDKNGNKMSK
RLGNAVDPFATIQQFGPDATRWYMIANAQPWDNLKFDVAGITEVQRRFFGTLFNTYSFYA
LYANLDGFQAREFDRTPHAELSELDRWILSKLQSLILEVRGHYDSYDPTKAARAIQDFVT
DQLSNWHVRLSRRRFWKGELTADKRAAYETLQECLVVVSQLMAPIAPFFAEWLYQNMTNG
MRAEAIERNTPLAAESVHLTLLVEADEARIDKALEERMELAQRISSLTHSLRKKSVLKVR
QPLQRILVPVFNDSTRAQVALVEDLICAEVNVKHVEFLDDASGVLVKSVKPNFKRLGQQY
GAKLKAVGARIQQMSAEEISTLEKTGQLAVEIDGEAYTLAPDDVEIRTQDLPGWLVATDG
PLTVALDVTLTDELRQEGVARELVNRLQNLRKDSGLEVQDKIRVTLQQQPELEAAVQSFG
GYIREEVQALSLDFAPEISGGAVLEFDEFSVPVLLNVATA
NT seq 3543 nt   +upstreamnt  +downstreamnt
atgcttcggcaagctcagcatgacgtgctgatagttactactacaagcaaagaaatgaac
taccccgaattcaagcagccgctcaactacggccaggtcggcaccgatatcctggcgtgg
tggaagcagaacggcatctttgagaaaagcgtgagcacccgcgaagggcagcccacgttc
gtgttttacgagggcccgccttcggccaacggcgcccccggcatccaccacgtgatggcc
cggacggtgaaggacatcttctgccgctaccagacgctgctgggcaagcaggtgcaccgc
aaaggcggctgggacacccatggcctgcctatcgagctgcaggtggaaaaggagctgggt
atcaccaaggaagatatcggcaagaaaatcagcatcgaggactacaaccagcgctgccgg
gagactgtcatgcgcttcaaggcccagtgggacgacctcaccgagaaaatgggctactgg
gtggacctcgacgacccctatatcaccttcgagcccgagtacatcgagagctgctgggcg
ctgctcaagaagctctacgacaagggcctgctctacaaaggctacaccatccagccctac
tccccggccgccggcaccggcctgtcgtcgcacgagctcaaccagcccggcacctaccgc
gacgtgaaggacacgacggtggtggcccagttcaaggtgaagcgcgacgagaagtcggag
ccgttgtttggcaacgtgcagctcgatgaagtgccgttggctgccctctacggcgacaat
gcctcggagccggacgtgtacatcttggcctggacgactacgccctggaccctgcccgcc
aacaccgggctggctgtgggcaagaacatcccgtacgtgctggtgagcaccttcaacccc
tacacctacgcgcccatccgggtggtgctggcggaggcgctggtgggcaaatacttctcg
gagaagggcaaagaagcttcgtttgaggacttcaagcccggtgacaaagtgctgccctgg
cgcatcgaaaacaccttcaaaggcgccgacctcgtgggcatcaactacgagcggctgttc
ggccagaacaaaggctatccggcgtttgagggcgaggaaaacgccttccgcgtcatcaac
ggcgacttcgtaaccaccgaggatggtaccggcatcgtgcacatctcgcccacgtttggt
gccgatgacttccgggctgcccaactggccggcgtgcccgccctgctggtagccgacgac
gaaggcaagctcggccccatcgtggaccgcacgggccgctacgtggcccagatgggcgaa
ttcggcggccgttgggtgaaaaactacgacggccacgatgagtcggacgccgactataag
actcttgacgaaagcattgccatccgcatgaaaggcgacggcacggccttcaaagtggag
aagtacgagcacacctacccgcactgctggcgcaccgacaagcccgtgctctattacccg
ctcgactcctggtttatcaaaaccacggcggtgaaagaccggctcatcgagctcaacaaa
accatcaactggcagcccgccagcaccggcaccggccgcttcggcaactggctggaaaac
ctggtggactggaacctgagccgctcgcgctactggggcacgcccctgcccatctggcgc
acccaggacggctcggaggaaatctgcatcggctcaatcgagcagctgaacgccgaaatc
gagaaggccgtcgccgccgaagtcatgacccacaacccctaccagctggtggacggcaac
tgggtgatggccaacggctcgacggaccaaaccgccaaaatcgacctgcaccggccctac
gtggacgacatcttcctggtgtcgccctcgggccagcccatgtaccgcgaaaccgacctc
atcgacgtgtggttcgacagcggtgccatgccctacgcccagtggcactatccgattgaa
aacgaagggcagttccagaagaacttccccgccgatttcattgccgaaggcgtggaccag
acccgcggctggttcttcaccctgcacgcgctggccgtgatgctggaagactcggtggcc
tacaaaaacgtgatggccaacggcttggtattggacaagaacggtaacaagatgagcaag
cgcctcggcaacgccgtggacccgtttgccaccatccagcagttcggccccgacgccacg
cgctggtacatgattgccaacgcccagccctgggacaacctcaagttcgacgtggccggt
atcacggaggtgcagcgccgcttctttggcacgctcttcaacacctactcgttctacgcc
ctctacgccaacctcgacggcttccaggcccgggagtttgaccgcacgccgcacgccgag
ctaagcgagctggaccgctggattctgagcaagctccagtcgctgattctggaagtgcgc
ggccactacgatagctacgaccccacgaaggccgcccgcgccatccaggatttcgtgacc
gaccagctctccaactggcacgtgcgcctctcgcgccgccgcttctggaagggcgagctg
accgccgacaagcgcgccgcctacgaaaccctgcaggaatgcctggtggtagtgtcgcag
ctcatggccccgattgcgcccttcttcgccgagtggctctaccaaaacatgaccaacggc
atgcgcgccgaagccatcgagcgcaacaccccgctggccgccgaatcggtgcacctgact
ttgctggtggaggccgacgaagcccgcatcgacaaggcgctggaggagcggatggagctg
gctcagcgcatttcttcgctcacgcactcgctccgcaagaagtcggtgctgaaggtgcgg
cagccgctgcagcgcatcctggtgccggtattcaacgattccacccgcgcccaggtggcc
ttggtggaagatctgatctgcgccgaggtgaacgtgaagcacgtagagttcctcgatgat
gccagcggcgtgctggtgaagtcggtgaagcccaacttcaagcgcctaggccagcagtac
ggcgccaagctgaaagccgtgggtgcccgcatccagcagatgagcgccgaggaaatcagc
accctcgaaaaaaccggtcagctggccgtggaaatcgacggcgaagcctacaccctggcc
cccgatgacgtggaaatccgcacccaagacctgcccggctggctggtggccaccgatggc
cccctcaccgtggcccttgacgtgaccctgaccgacgagttgcgccaggaaggcgtggcc
cgcgagctggtgaaccgcctccagaacctgcgcaaagacagcggcctggaagtgcaggac
aaaatccgggtgacgctgcagcagcagcccgagctggaagccgccgtgcagtcgttcggc
ggttacatccgtgaggaagtgcaggccctgagcctggatttcgccccggaaatcagcggc
ggcgcggtgctggaattcgatgagttttccgtgccggtgctgctgaacgtagcaactgcc
taa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (41)   

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