KEGG   Hydrogenophaga sp. PBC: Q5W_07990
Entry
Q5W_07990         CDS       T04491                                 
Name
(GenBank) DNA polymerase III, subunit gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
hyb  Hydrogenophaga sp. PBC
Pathway
hyb03030  DNA replication
hyb03430  Mismatch repair
hyb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hyb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Q5W_07990
   03430 Mismatch repair
    Q5W_07990
   03440 Homologous recombination
    Q5W_07990
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hyb03032]
    Q5W_07990
   03400 DNA repair and recombination proteins [BR:hyb03400]
    Q5W_07990
Enzymes [BR:hyb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Q5W_07990
DNA replication proteins [BR:hyb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Q5W_07990
DNA repair and recombination proteins [BR:hyb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Q5W_07990
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA DNA_pol3_tau_5 RuvB_N AAA_22 AAA_18 AAA_14 DUF3646 AAA_19 AAA_30 AAA_5 SKI Rad17 Adeno_E1B_55K_N AAA_16 TsaE nSTAND3 AAA_2 Herpes_Helicase AAA_28
Other DBs
NCBI-ProteinID: AOS78900
Position
1707564..1709537
AA seq 657 aa
MSYVVLARKYRPRNFREMVGQGHVVQALANALTSQRLHHAYLFTGTRGVGKTTVSRILAK
SLNCTGPDGQGGITAEPCGVCQACTDIDAGRFVDYTELDAASNRGVDEVQSLLEQAVYKP
VQGRFKVFMIDEVHMLTNTAFNAMLKTLEEPPEYLKFVLATTDPQKVPVTVLSRCLQFNL
RPMAPETVAEHLQQVLQAEGVTAEPQALRLLSRAARGSMRDALSLTDQAIAFGGGQLMEA
PVRQMLGAVDRSHVLRLIDALARADGASVVETVNALRVNGLSAASTLEEMTGLLQRMAVL
QSVPDAAATDDDPDTPEIARLAAALPPDETHLLYSLCLHGRTELGLAPDEYAALTMVLLR
LLAFKPSGAAEKKTLKPAEARPATAPAPVAAIAPAQAPVRAPVASPNAAPAPRAAAPAPL
VAPPAPAAASQRPAPSPSPTPLATAAAAAPAQARQPSEPEPFDGPPIDDAPWPEPDDDLP
PWDPEPAPAMSRPAAAPAPAAPVVRIPVRDPGAPGRLDQPRPPSAPLQPTPEGDFWAGVV
QQMVDSGAIAALTRELALQSQLVSRDGSRWLLRIERETLAQGSNRDRLTAALHTAGRAVE
LVLENGAVTDSPARRAAAEAERRQREAEQQILGDPFVQAMMRDFGGTIVPGSLKAIT
NT seq 1974 nt   +upstreamnt  +downstreamnt
atgtcctacgtcgtcctcgcccgcaagtaccgcccgcgcaatttccgcgagatggtcggc
cagggccacgtggtgcaggccctcgcgaacgcgctcaccagccagcgccttcaccacgcc
tacctgttcaccggcacgcgcggcgtgggcaagaccacggtctcccgcatcctggccaaa
tcgctcaactgcaccgggcccgacgggcagggcggcatcaccgccgagccctgcggcgtg
tgccaggcttgcaccgacatcgacgccggccgcttcgtggactacaccgagctcgacgcc
gcctccaaccgcggcgtggacgaggtccagtcgctgctcgagcaggcggtctataagccg
gtgcagggccgcttcaaggtgttcatgatcgacgaggtccacatgctcaccaacaccgcg
ttcaacgcgatgttgaagacgctggaggaaccgcccgagtacctcaagttcgtgctcgcc
accaccgacccgcagaaggtgccggtgacggtgctgtcgcgctgcctgcagttcaacctg
cgccccatggcccccgagacggtggcggagcacctgcagcaggtgctgcaggccgagggc
gtgacggccgagccgcaggccctgcgcctgctgtcgcgcgccgcgcgcggctccatgcgc
gacgcgctgtcgctcaccgaccaggccatcgccttcggcggcggccagttgatggaagcg
cccgtgcgccagatgctgggcgcggtggaccgcagccacgtgctgcgcctgatcgacgcg
ctggcgcgcgccgacggcgcgagtgtggtggagacggtgaacgcgctgcgcgtgaacggc
ctgagcgccgcctcaacgctggaggaaatgacgggcctgctgcagcgcatggccgtgctg
cagagcgtgcccgacgcggccgccaccgacgacgaccccgacacgcccgagatcgcgcgc
ctggccgcggccctgccgcccgacgagacgcacctgctctacagcctgtgcctgcacggc
cgcaccgaactgggcctggcgcccgacgagtacgcggcgctgaccatggtgttgctgcgg
ttgctggcgttcaagccctcgggcgcggcggaaaaaaaaactctgaagcccgctgaggcg
cggcccgcgacggcaccggcaccggtcgcggcgattgcgcccgcgcaagctcccgtgcgc
gccccggtcgcctcgcccaacgctgcgcccgcccccagggcggccgcaccagcgcccttg
gtggccccgcccgcacccgcggcagcgtcccagcggccggccccaagcccgtcgccaacc
ccgctggccaccgctgccgcagccgctcccgcccaggcccgccagcccagtgagcccgag
cccttcgacggcccaccgatcgacgacgccccctggccagagcccgacgacgacctgccg
ccctgggacccggaacccgcgcccgccatgtcccggcccgccgctgcaccggcgcccgcc
gcgccggtggtgcgcatccccgtgcgcgaccctggcgcgccgggccggctcgaccagccc
cgcccacccagcgccccgctgcagcccacgcccgaaggcgatttctgggccggcgtggtg
caacagatggtggacagtggcgccatcgccgcattgacgcgcgaactcgcgctgcagtcg
caactggtgtcgcgcgatggatcgcgctggctgcttcgcatcgaacgcgagacgcttgcg
cagggcagcaaccgcgaccgcctcacggccgcgctgcacacggcgggccgcgcggtcgag
ctcgtgctggaaaatggcgcggtcaccgattcgcccgcgcgccgagccgccgccgaggcc
gagcgccgccagcgcgaggccgagcagcagatcctcggcgatccctttgtgcaggccatg
atgcgcgacttcggcggcacaatcgtgcccggctcgctcaaagcgataacctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (21)   
   Pfam (21)   
All databases (33)   

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