KEGG   Intrasporangium calvum: Intca_0130Help
Entry
Intca_0130        CDS       T01385                                 

Definition
(GenBank) DNA-(apurinic or apyrimidinic site) lyase; Formamidopyrimidine-DNA glycosylase
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ica  Intrasporangium calvum
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:ica00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Intca_0130
Enzymes [BR:ica01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Intca_0130
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Intca_0130
DNA repair and recombination proteins [BR:ica03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Intca_0130
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
Position
138440..139300
Genome map
AA seq 286 aa AA seqDB search
MPELPEVQALVDFLAERTAGLAVTKVELASISALKTFNPPPQSLEGAPIDGVHRHGKFLD
IDCDGTHLVFHLARAGWLRWSDQLPTTVLRPGKSPIALRVRLSDGSGFDLTEAGTKKSLA
AYIVRDPKEVPGVARLGPDPLADDFTLERFRELLTGRRTQIKGLLRDQEVIAGVGNAYSD
EILHVAKVSPFAIAGSLPPDVVDRLYAALRETLSSAVHAASGKPAKELKDAKRAGMRVHA
RTGQACPECGDVVREVSFADTSLQYCATCQTGGKPLADRRMSRLLK
NT seq 861 nt NT seq  +upstreamnt  +downstreamnt
atgcctgagctgcccgaggtgcaggcgctcgtcgacttcctcgccgagcggacggccggc
ctggccgtgacgaaggtcgagctggcctcgatcagcgcgctcaagacgttcaacccgccg
ccccagtcgctcgagggggcacccatcgacggggtgcacaggcacgggaagttcctcgac
atcgactgcgacggcacccatctcgtcttccacctcgcccgggccggctggctgcggtgg
agcgaccagctgccgacgaccgtgctgagacccggcaagtccccgatcgccttgcgcgtc
aggctctccgatggcagcggcttcgacctgaccgaggccggcacgaagaagtcgctcgcc
gcctacatcgtccgcgaccccaaggaggtgcccggtgtcgcccggctcgggccggacccc
ctcgccgacgacttcacgctggagcgcttccgggagctgctcaccggtcggcggacccag
atcaagggcctgctccgcgaccaggaggtcatcgccggggtcgggaacgcctacagcgac
gagatcctccacgtggcgaaggtcagccccttcgccatcgccgggagcctgcccccggac
gtggtggaccgcctctacgcagcgctccgcgagacgctgtcgagcgccgtgcacgctgct
tcgggcaagccggccaaggagctcaaggatgccaagcgggcaggcatgcgcgtccatgcc
cgcacgggccaggcctgccccgagtgtggcgacgtcgtgcgggaggtgagcttcgccgac
acctcgctgcagtactgcgccacctgccagaccggtggcaagccgctcgccgaccggcgg
atgtcccggctgctcaagtag

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