KEGG   Intrasporangium calvum: Intca_3246
Entry
Intca_3246        CDS       T01385                                 
Name
(GenBank) lysyl-tRNA synthetase
  KO
K04566  lysyl-tRNA synthetase, class I [EC:6.1.1.6]
Organism
ica  Intrasporangium calvum
Pathway
ica00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:ica00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Intca_3246
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ica01007]
    Intca_3246
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ica03016]
    Intca_3246
Enzymes [BR:ica01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     Intca_3246
Amino acid related enzymes [BR:ica01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   Intca_3246
Transfer RNA biogenesis [BR:ica03016]
 Prokaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    Intca_3246
SSDB
Motif
Pfam: tRNA-synt_1f Nudix_N_2 tRNA-synt_1g TF_Zn_Ribbon
Other DBs
NCBI-ProteinID: ADU49730
UniProt: E6SDP9
Position
complement(3585472..3587271)
AA seq 599 aa
MGTVAPEDWVTRLADEVIAEATARGIDTIVCASGISPSGPIHLGNFRELITPHLVADEIK
RRGVSCEHILSWDDFDRFRRVPKGLPGVDESWEEHIGKPLTSVPAPEGSPHANWAEHFKA
PLLEAMAATGIEVREISQTEQYRAGVYREQVLHAMRERGVIDTVLGRYRTLEVAAEAQQR
ATGKGRRPVEAGGKPQKLTEEQVAAATEAERGSGAATEDDGEGTAGYFPFKPFCSVCGTD
FTTVTAYDDDSHELTYVCTRCGHAEAVNLDTFTNGKLVWKVDWPMRWAHERVLFEPSGVD
HQSPGSSFVVGKDLAPLFGWQRPIGPMYAFVGIAGMAKMSSSKGGVPIPNDALEVMEPQV
LRWLYARRRPNQSFDVAFGPELQRLYDEWDALARKVEAGPDGGAQPGDLAAHLRATTVAS
TGGVRALPTTRRPMPFRTIASVIDITQGDEAQAVRILSDLDPDDPIVSTDDLRPRLDCAE
RWMLGYVPAEDRTIVRDEPDQDLLASLDEEQRESLRLLVDGLEEHWSLEGLTHLVYAVPK
LQRGLDPEAKVKDPELSRAQRAFFALLYRLLVSKDTGPRLPTLLLAVGADRVRRLLRAG
NT seq 1800 nt   +upstreamnt  +downstreamnt
gtgggcacggttgcaccggaggactgggtcacgcggctcgccgacgaggtgatcgccgag
gcgacggctcgggggatcgacacgatcgtgtgtgcgtcggggatcagtccctcgggtccg
atccacctcgggaacttccgcgagctgatcaccccgcacctcgtcgcggacgagatcaag
cgccgcggggtgagctgcgagcacatcctgtcctgggacgacttcgaccggttccggcgc
gtgcccaaggggctccccggggtcgacgagtcctgggaggagcacatcggcaagcccctg
acctcggtgccggctccggagggctcaccgcacgcgaactgggctgagcacttcaaggcg
ccgctcctcgaggcgatggccgcgaccggcatcgaggtgcgtgagatcagccagacggag
cagtaccgcgccggggtctaccgcgagcaggtgctccacgccatgcgcgagcgcggcgtc
atcgacaccgtcctcgggcgctaccgaacgctcgaggtcgcagcggaggcgcagcagcgc
gccaccggcaagggccgacgcccggtcgaggccgggggcaaaccccagaagctcaccgag
gagcaggtcgccgcggcgaccgaggccgagcgcggttcgggggcggccaccgaggacgac
ggcgaggggacggccggctacttcccgttcaagccgttctgctcggtgtgcggcacggac
ttcaccacggtcaccgcctacgacgacgactcccacgagctgacctatgtctgcaccagg
tgcggtcatgccgaagcggtcaacctcgacacgttcaccaacggcaagctcgtctggaag
gtcgactggccgatgcgctgggcgcacgagcgcgtgctcttcgagccctcaggcgtcgac
caccagagccccggctcgagcttcgtggtcggcaaggacctcgccccgctcttcgggtgg
caacgcccgatcggccccatgtatgccttcgtcggcatcgcggggatggccaagatgagc
tcgtccaagggtggggtgccgatccccaacgacgccctcgaggtgatggagccgcaggtc
ctgcgctggctctatgcgcggcgccggcccaaccagagcttcgacgtcgccttcggcccg
gagctccagcggctctacgacgagtgggatgcgctggcccgcaaggtcgaggccggtccc
gacggcggcgctcagccaggtgatctcgcggcccacctccgggcgacgacggtggcctca
accggcggcgtccgcgccctgccgacgacgcgccggccgatgccgttccggaccatcgcc
tcggtcatcgacatcacccagggcgacgaggcccaggcggtgcggatcctctcggacctg
gaccccgacgaccccatcgtgtcgacggacgacctgcggccccggctcgactgcgccgag
cggtggatgctcggctacgttcccgccgaggaccggaccatcgtgcgcgacgagccggac
caggacctcctcgccagcctcgacgaggagcagcgtgagtcgctgcggttgctcgtcgac
ggactcgaggagcactggtccctcgagggtctgacccacctcgtctacgccgtgccgaag
ctccagcggggcctcgacccggaggccaaggtcaaggacccggagctgtccagggcgcag
cgggccttcttcgcgctcctctaccgactgctcgtctcgaaggacaccggcccccgcctg
ccgacgctgctgctggccgtcggcgccgaccgggtccgcaggcttctgcgcgctggctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (35)   

Download RDF
DBGET integrated database retrieval system