KEGG   Candidatus Ishikawaella capsulata: ICMP_537
Entry
ICMP_537          CDS       T04149                                 
Symbol
birA
Name
(GenBank) biotin--protein ligase
  KO
K03524  BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
Organism
icp  Candidatus Ishikawaella capsulata
Pathway
icp00780  Biotin metabolism
icp01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:icp00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00780 Biotin metabolism
    ICMP_537 (birA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:icp03000]
    ICMP_537 (birA)
Enzymes [BR:icp01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.4  Other carbon-nitrogen ligases
    6.3.4.15  biotin---[biotin carboxyl-carrier protein] ligase
     ICMP_537 (birA)
Transcription factors [BR:icp03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    ICMP_537 (birA)
SSDB
Motif
Pfam: BPL_LplA_LipB BPL_C HTH_11 HTH_5 Mga MarR_2 HTH_24 HTH_28 HTH_Crp_2 BPL_LplA_LipB_2 HTH_20
Other DBs
NCBI-ProteinID: BAH83380
UniProt: C5WDH4
Position
complement(606827..607810)
AA seq 327 aa
MRYFVIDCSIKLKLITFLSDGNMYSGEKLGRILGISRAAVNKHISQLKEWGLNIHSMPSQ
GYILLTPIQLLDSVMILSKLNNPSISIINIVDSTNQYLLERIDILQSGDTCIAEYQQAGR
GRRGRQWFSPFGANLYLSMYWRLDQGPESVVGLSLVVSVILAEVLWKIGITDIRVKWPND
IYLYDRKVGGILVELIGATGDTAKIVIGIGINISMYTSNNLLINQNWINLDAAGIQINRN
ELAAQLINHLRYSLYQFEQQGFNAFIKRWLKLDNFINRPVKLLLANQEVYGISRGIDRQG
RLLLEQANGKIKSWVSGDISLRIQQKD
NT seq 984 nt   +upstreamnt  +downstreamnt
ttgaggtactttgtgatagattgtagcatcaaacttaaattaattacttttctatctgat
ggaaatatgtattctggagaaaaattaggcagaatattaggtataagtcgagcggccgtc
aataagcatatttctcaattaaaagaatggggtttaaatattcatagtatgcctagtcaa
gggtatattttattaactcctatacaattacttgattctgttatgattttatctaaatta
aataacccgagtatatcaattattaatattgtcgattctacaaatcaatatttattagaa
agaatagatattcttcagtccggagatacttgtatagctgaataccaacaagcagggcgg
gggcggagaggtagacaatggttttcaccatttggcgctaatttatatctttccatgtac
tggcgcctagatcaaggaccagaatctgttgtaggattaagtttggttgttagtgttatt
ttagcagaggttttatggaaaataggaataacagatatcagagtaaaatggccaaatgac
atttatttatatgatcgtaaagtaggaggtattttagttgagcttataggagcaacagga
gatacagctaaaattgttattggcataggtattaatatttcaatgtatacttcaaataac
ttacttattaatcaaaattggatcaatctagatgcagcgggtattcagattaatcgtaat
gaactagcggcccagctaattaatcatttacgttattcattgtatcaatttgaacagcaa
ggttttaacgcgtttattaaacgttggttgaaattagataattttattaacagacctgtt
aaattattgttagctaatcaagaagtatatggaatatcacgtggtatcgataggcaagga
cgtctattgttagaacaggcaaatggaaagattaaatcttgggttagtggtgatatttca
ttacgtatacaacaaaaagattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (41)   

Download RDF
DBGET integrated database retrieval system