KEGG   Idiomarina loihiensis L2TR: IL0949
Entry
IL0949            CDS       T00218                                 
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
ilo  Idiomarina loihiensis L2TR
Pathway
ilo03030  DNA replication
ilo03430  Mismatch repair
ilo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ilo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    IL0949 (holA)
   03430 Mismatch repair
    IL0949 (holA)
   03440 Homologous recombination
    IL0949 (holA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ilo03032]
    IL0949 (holA)
   03400 DNA repair and recombination proteins [BR:ilo03400]
    IL0949 (holA)
Enzymes [BR:ilo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     IL0949 (holA)
DNA replication proteins [BR:ilo03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     IL0949 (holA)
DNA repair and recombination proteins [BR:ilo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     IL0949 (holA)
SSDB
Motif
Pfam: DNA_pol3_delta DNA_pol3_delt_C DNA_pol3_delta_C TPR_7
Other DBs
NCBI-ProteinID: AAV81789
UniProt: Q5QYC9
Position
1004084..1005166
AA seq 360 aa
MQTIYPEKLEHFLQHNGIPPVLLVFGDDLLLRNDALASIRKSLASDDLERVHWLQSKDFD
WQQLSAGEQSMSLFGNMRLVELELPENKPGRDGSAALTEYAKNQADSEILVVIGDRLKKE
TQNSRWFKALAERGPLVRTQSPDKSQLPAFIHQRAQRYQLILAAGVPEKLSDWFEGNLLA
LDQELSKWQLLSNDGVITEDFLKSSIDDVSRFSVFALQESIQQQDFEGALHRLERLLDEE
NDFHRLIWILQREVQLLTALQKAKQTQTDTNALFRQFMIWPNQQPGYHQRANQLSQQTLL
SAQQLIERIEAALKLDSGESPLTLTTHLLSLLCCNNANAINDGLSVFNHGIEPNEKFIQL
NT seq 1083 nt   +upstreamnt  +downstreamnt
atgcaaactatctaccctgaaaagctcgaacacttcctgcaacataatgggattccccct
gtcctgctagtgtttggtgatgaccttttactcaggaacgacgcgctggctagtattcga
aaaagcttagccagtgatgacctcgagcgggtgcattggttacaaagtaaagacttcgac
tggcagcaactgtctgccggtgagcagtcaatgagcctgtttggcaatatgcggctggtt
gagctggaattgcccgaaaacaaacccggtcgggacggttctgccgcattgaccgaatac
gcaaagaatcaggccgacagcgaaattctggttgttattggcgaccggttaaaaaaagag
acccaaaacagtcgctggtttaaagcactggcagaacgcggtccgctggttcgcacccaa
agcccggataagtcacagttgcccgcctttattcaccagcgtgctcagcgttatcaactc
attctcgccgcgggtgtcccggaaaagttatcagactggtttgaaggaaatttacttgct
ctggatcaggaactcagtaaatggcaattgctgagcaacgatggtgtcattacggaagac
tttctgaaaagctccattgatgatgtcagccgctttagtgtgtttgcgctgcaggaaagt
atccagcagcaagatttcgaaggtgcgttgcatcgcctcgagcgcttactggacgaagaa
aatgactttcacaggcttatctggattttgcagcgcgaagtacaattgctaacagcgttg
caaaaagctaagcagacacaaaccgatacaaacgcgcttttccgtcaatttatgatttgg
cctaatcagcaaccggggtatcaccagcgcgcaaatcaattgagccagcaaactctattg
agtgcacagcaactcattgagagaatagaagcggcgcttaagctcgatagcggcgaatct
cctcttacattgacaacacatctactcagtttactttgctgcaataatgccaacgccatt
aatgacggactttcggtatttaaccacggcattgaaccgaacgaaaaatttattcagcta
tga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (35)   

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