KEGG   Ictalurus punctatus (channel catfish): 108256234
Entry
108256234         CDS       T04658                                 
Name
(RefSeq) CAD protein isoform X1
  KO
K11540  carbamoyl-phosphate synthase / aspartate carbamoyltransferase / dihydroorotase [EC:6.3.5.5 2.1.3.2 3.5.2.3]
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu00240  Pyrimidine metabolism
ipu00250  Alanine, aspartate and glutamate metabolism
ipu01100  Metabolic pathways
ipu01240  Biosynthesis of cofactors
Module
ipu_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00240 Pyrimidine metabolism
    108256234
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    108256234
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ipu01002]
    108256234
Enzymes [BR:ipu01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.3  Carboxy- and carbamoyltransferases
    2.1.3.2  aspartate carbamoyltransferase
     108256234
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.2  In cyclic amides
    3.5.2.3  dihydroorotase
     108256234
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.5  carbamoyl-phosphate synthase (glutamine-hydrolysing)
     108256234
Peptidases and inhibitors [BR:ipu01002]
 Cysteine peptidases
  Family C26: gamma-glutamyl hydrolase family
   108256234
 Metallo peptidases
  Family M38: beta-aspartyl dipeptidase family
   108256234
SSDB
Motif
Pfam: CPSase_L_D2 GATase CPSase_sm_chain OTCace_N OTCace CPSase_L_D3 MGS ATP-grasp Dala_Dala_lig_C ATPgrasp_Ter Amidohydro_1 Peptidase_C26 ATP-grasp_3 DJ-1_PfpI GARS_A GSH-S_ATP
Other DBs
NCBI-GeneID: 108256234
NCBI-ProteinID: XP_017308360
Ensembl: ENSIPUG00000002300
UniProt: A0A2D0PTD7
Position
2:11034841..11070267
AA seq 2225 aa
MSAEMASLILEDGTTFKGRLFGANISVSGEVVFQTGMVGYPEALTDPSYKSQILTLTYPL
IGNYGVPNDVNGEFGFSKWFESARIHAAALIVGEVSQNPSHWSSDKSLDKWLKEHGVPGL
QGVDTRSLTKKIREKGTMLGKLVVEGTLADSVPFDNPDTRNLVKDVSLKEPRVFNTEGSV
RILAVDCGIKYNQIRCLCERGARVTVVPWDYPLNANDFDGLFISNGPGDPNYCKETIENL
KKIVCVENPKPVFGICLGHQLLSLVIGAKTYKMKYGNRGHNQPCIHKGTERCFITSQNHG
FAVDPQTLPDDWDVLFTNANDHTNEGIVHNSKPLFSVQFHPEHKAGPADLVSLFDVFLGI
VQDAKKGNVGKSVKERLTDHLTFPGSPKPEDFVRPRKVLILGSGGLSIGQAGEFDYSGSQ
AIKALKEENIQTILINPNIATVQTSKGLADKVYFLPITSDYVSQVIKNERPDGVLLAFGG
QTALNCGVELTKLGVLEKYNVRVLGTPVASIEMTEDRKIFVEKMEEINEHVAPSEAAMSV
EQAVAAAERLGYPVLIRSAFALGGLGSGFANNKEELITLVMQAFAHTSQVLVDKSLKGWK
EIEYEIVRDAYDNCITVCNMENIDPLGIHTGESIVVAPSQTLNDYEYNMLRSTSIKVIRH
LGIVGECNIQYAVNPESEQYYIIEVNARLSRSSALASKATGYPLAYVAAKLGLGIPLPFL
KNSVTNSTTANFEPSLDYCVVKVPRWDLSKFLRVSTKIGSSMKSVGEVMAIGRSFEEAFQ
KALRMVDENCVGFDHTIKPVSEQELQIPTDKRIFVLAAALYADYSIDRLYELTKIDRWFL
YKMKNIIDHEKLLETYNQDESAMLPEVMRRAKQLGFSDKQIALSVQSTELAVRKLRHDWK
ILPMVKQIDTVAAEWPAHTNYLYLTYHGMESDVAFDEPHVMVIGSGVYRIGSSVEFDWCA
VGCIKELRKMGYKTIMVNYNPETVSTDYDMCDRLYFDEISFEVVMDVYEMENPEGVILSM
GGQLPNNIAMSLHRQQCRILGTSPEFIDSAENRFKFSRMLDTIGISQPRWKELSDTESAM
QFCDAVGYPCLVRPSYVLSGAAMNVAYSHSDLEKYLSSAVAVSKEHPVVISKFIQEAKEI
DVDAIACDGVVIAIAVSEHVENAGVHSGDATLVTPPQDINQKTMERIKLIVHAIGQELQV
TGPFNLQLIAKDDQLKVIECNVRVSRSFPFVSKTLGVDLVALATQVIMGQEVEAVGLMTG
IGIVGVKVPQFSFSRLAGADVVLGVEMTSTGEVACFGENRYEAYLKAMLSTGFKIPKKNI
LLSIGSYKNKSELLPTIQALESLGYNLYASLGTADFYTEHGVKVMAVDWPFEEESDCPNK
DKQRNIMDYLEENHFDMVINLSMRNAGGRRLSSFVTKGYRTRRMAVDYSVPLIIDIKCTK
LFVQALRQIGQAPPIKTHIDSMTSQKLIRLPGLIDVHVHLREPGATHKEDFSSGTAAALA
GGITMVCAMPNTNPPVIDPGSLALVQKLAKAGCRCDYALYVGAGSDNATILPSIANASAG
LKMYLNDTYSTLKMDNVSLWMEHFEKWPKNLPIVAHAERQTVAAILMVAQLYQRPVHICH
IAKKEEILIIRAAKQKGIQVTCEVAPHHLFLCEDNISVLGDGRAQVRPMLGTREDMEALW
ENLDIIDCFATDHAPHSVGEKDSEKPPPGYPGLETMLPLLLTAVSEGRLTVDDIIKRLYE
NPARIFSLPPQENTYVEVDLEQEWIIPKHMQFTKSKWTPFEGMRVKGKVMRVVLRGEVAY
IDGQVLVPPGYGEDVKTWSSVPVQSSVPEIPKDIQKTPEHPRQATPSESLRARAASPRRS
AGDRFMLPPRVHHTSDPGLPPEMAPFAETCTYPPPLARILSPQMSQPLAVSHIQTSPLLH
PLVGQHILSARQFTKEQMSHLFNVAHTLRLMVQKERSLDILKGKVMASMFYEVSTRTSSS
FAAAMQRLGGSVVHFSESTSSTQKGESLTDSVQTMCCYADVIVLRHPVPGAVEKAAKHCR
RPVINAGDGVGEHPTQALLDIFTIREELGTVNGMTITMVGDLKHGRTVHSLARLLTQYRI
SLRYVSPKNLSMPHEIVDFVASKGIKQEEFSSIEEALPDTDVLYITRIQKERFASEEEYK
ACFGKFILTPHIMTGAKRKMVVMHPLPRVNEISVEVDTDPRAAYFRQAENGMYIRMALLA
TVLGR
NT seq 6678 nt   +upstreamnt  +downstreamnt
atgtcggcggaaatggcatctctgatcctggaggacggaaccacgtttaaaggccgtctt
ttcggtgccaatatttcagtatctggtgaagttgttttccagacaggaatggtgggctat
ccagaggctctcactgacccctcgtataaatctcagatactgactttaacctacccactg
attgggaactatggtgtacccaatgatgtcaatggtgaatttggatttagcaagtggttt
gaatctgccaggatccatgcagctgctcttatagttggggaggtttctcagaatcccagc
cactggagctcagacaagtctctagataagtggctcaaagagcatggtgtccctgggcta
cagggagttgacacgcgctctttgaccaaaaagatccgggaaaaagggaccatgctgggg
aagcttgtggtggaagggaccttagcagacagcgtaccttttgacaatcctgatactcgg
aacttggtgaaagatgtgtctttgaaagaacccagggttttcaatacggagggtagcgta
aggatccttgcagtggactgcggcattaagtacaatcagatccgctgcttgtgtgagaga
ggtgcccgggtcaccgtggtgccgtgggattaccctctgaacgccaacgactttgatgga
ctgtttattagtaatggtcctggtgaccccaactattgcaaggagactatagaaaacctg
aaaaagattgtatgtgtggaaaacccgaaacctgtgtttggaatttgcttgggtcatcag
ttgctgtcgttggttattggtgcgaagacgtacaaaatgaaatacgggaatcgtgggcat
aaccagccttgcatccataagggtacagagcgttgtttcatcacatctcagaaccatgga
tttgcagtggatcctcagacccttccagatgactgggatgttctctttaccaacgccaat
gaccacacaaatgagggcattgtgcacaacagtaaacctcttttcagtgtccagttccat
cctgagcacaaggctggacccgctgatttggtgagccttttcgatgtttttctgggcatc
gtccaagatgccaaaaagggcaacgttggcaagtcagtaaaggagaggctgactgaccat
ctgaccttccccggatctccaaagccagaagactttgttcggccccgcaaagttctcatt
ctaggttctggaggactctctattggacaggctggagaatttgattattctggctctcag
gcaattaaagcgctcaaagaagagaacatccagactattctcatcaaccctaacattgcc
acagtgcagacctctaaaggcctggctgacaaagtatacttcctcccaatcacctcagat
tatgtctcacaggtaatcaagaatgagcgtcctgatggagtgctgctggcatttgggggt
cagacggctctaaactgtggagtggaactgactaagctgggtgtactggagaagtataac
gtcagggttttgggaactccagtggcctctattgagatgactgaggacaggaagatcttt
gtggagaaaatggaggagatcaacgagcatgttgcaccaagcgaggcagccatgtctgtg
gaacaggcagtagctgctgccgagaggctcggctacccagtgctgatccgttcagccttt
gcgcttggtggactgggctctggttttgctaacaacaaagaagagttgatcacgctggtc
atgcaagcctttgcccacacatctcaagtcctggtggacaagtccctcaagggctggaag
gaaattgagtacgaaatcgtacgagatgcttacgacaactgcatcacggtttgtaacatg
gaaaacatagaccctctgggaattcacaccggcgagtctatagttgtggctcctagtcag
acgctgaatgattatgagtacaacatgctgaggagcacctccatcaaggttatccggcac
ctggggattgttggcgagtgcaacatccagtacgcggtcaacccagaatctgagcagtac
tacatcattgaggtgaatgctcgtctctcccggagctccgctctggctagtaaggccaca
ggataccctctggcctatgttgcagctaagcttggcctgggaatccccctccctttcctc
aaaaactctgtgaccaactccacaaccgccaacttcgagcccagtcttgactactgtgtg
gtgaaggttcctcgctgggacttgagcaagttcctcagggttagcaccaaaataggcagc
tccatgaagagtgtcggggaagtgatggccattgggcgcagttttgaggaggctttccaa
aaagctctcaggatggtagatgagaactgtgttgggtttgaccataccatcaaaccagtt
tctgaacaggagctacagattcctacagacaagcggatatttgtgctggcggcagccctg
tatgccgactacagcatagatcgactgtatgagctgaccaaaattgaccgctggttcctg
tacaagatgaaaaacatcatagatcacgagaagctcctggaaacgtataatcaggatgaa
agtgcgatgctgcctgaggtgatgagaagggcaaagcagttgggcttctcagacaagcag
attgctctctctgtgcaaagcaccgagctggccgtgagaaagctgaggcatgattggaag
attttgcccatggtaaagcagattgacacggtggctgctgagtggcctgcccacaccaac
tacctctacctgacgtatcatggcatggagagtgacgtagcctttgatgaacctcatgtc
atggtgatcggctctggcgtctaccgcatcggcagcagcgtggaattcgactggtgtgcc
gtgggatgcattaaggagcttaggaagatgggttacaagacaataatggtgaactacaat
cccgaaacggttagcacagactatgacatgtgcgacagactctattttgatgagatctcg
tttgaggtggtgatggacgtgtacgagatggagaacccagagggagtgattctttctatg
ggaggccagctccccaacaacatcgccatgtctttgcacaggcagcagtgccgcatcctg
ggcacatcgcccgagtttattgactcagccgagaaccgttttaaattttctaggatgctg
gacaccattggaatcagccaaccgcgctggaaagagctgtccgatacagagtcagccatg
cagttttgtgacgcagtgggctacccgtgcctagtgaggccgtcctacgtgctcagcgga
gcggccatgaacgtggcctactctcatagtgacctggagaagtacttgagcagcgctgtt
gctgtgtctaaagagcaccctgttgttatctccaaatttatccaggaagccaaggaaatt
gacgtggatgctatagcgtgtgacggggtggtcattgccattgctgtttccgagcatgtc
gagaacgccggagtgcattctggtgatgctacgttggttacaccaccacaggacatcaac
cagaagaccatggagcgcattaaattgatcgtgcacgccatcggtcaggagctacaagtc
acaggaccgtttaacttgcaactcatcgccaaggatgaccagttgaaagtgattgagtgc
aatgtacgagtgtcgcgctccttccctttcgtctccaaaacactgggcgtagatcttgtg
gctttggcgacacaggtcatcatgggacaggaggtggaagctgtgggactcatgacgggg
atcggcattgtgggagttaaggttccgcagttctccttctctcggctggccggggctgac
gtagtgttgggtgtggaaatgacgagcaccggcgaggtggcctgctttggtgagaaccgt
tatgaggcgtacctgaaagccatgctcagcacggggttcaaaatcccgaagaaaaacatt
ctcctctccattggcagctacaagaataaaagtgagctgctgcctacaattcaggcttta
gagagccttggctataacctgtatgccagcttgggcacggctgacttctacactgaacat
ggcgtcaaagtaatggctgtagactggcctttcgaagaggaaagtgactgccccaacaag
gacaagcagagaaacatcatggactacttggaggagaaccactttgacatggtgattaac
ctgtccatgaggaatgcgggcggtaggcgtttgtcctcctttgtcactaaaggataccgt
acccgtcgcatggctgtggactattctgtacctctgatcatcgatatcaagtgcaccaag
ctctttgttcaggcgctgagacagattggtcaagctcctccgatcaagactcacattgac
agcatgacgtcccagaaactgattcgtttacctggcctcattgatgtccatgtacacctg
cgagaacctggtgccacgcacaaggaggatttctcctcgggcacagccgccgccctggca
ggaggcattaccatggtgtgtgccatgccgaacaccaaccctcctgtgatcgatcccggc
tctctagccctggtccagaagctggcgaaggcaggatgtcgctgtgactatgctttatac
gtgggggcgggttcagacaacgccactattctgccctccattgcgaacgcctcggctggt
ctgaaaatgtacttgaatgatacttactcaactttgaaaatggacaatgtttccttgtgg
atggagcattttgaaaagtggccaaagaatttacctatagtggcccatgcagagaggcag
accgtggcggccattttgatggtagctcaactctaccagagacctgttcacatttgccat
attgccaaaaaagaggagatcttgatcatccgagccgcaaagcagaagggcatccaggtg
acatgtgaagtcgcacctcatcacctcttcctgtgtgaagacaacatatccgttctaggg
gatggcagggctcaggtgcgacccatgctgggcacccgagaggacatggaggcgctgtgg
gaaaatctggatatcattgactgttttgccactgatcatgctcctcactcggtgggtgag
aaggactcagaaaagcctccaccaggctacccaggcctggagactatgctgcccctgctg
ctcaccgccgtcagcgaaggccgtctcaccgttgatgacatcatcaaacgtctctacgag
aacccagctcgaattttctctcttcctcctcaagagaatacctacgtggaggtggatttg
gagcaagagtggatcatcccgaagcacatgcagttcacgaagtcgaagtggactcctttc
gagggcatgagggtgaagggtaaagtgatgcgagtggtgctgagaggggaggtggcctac
attgatggacaggtactggtacctcctggttacggtgaagatgtgaagacgtggtcatca
gttccagttcagtcatcagttcctgaaatacctaaggatatccaaaagacccctgagcat
cctagacaagcgactcctagtgaatctctgcgtgctcgagctgcgagtccacgcagatca
gctggggaccgtttcatgctccctcctcgcgtccaccacacttctgatcctggtctgcca
ccagaaatggccccttttgcagagacgtgcacataccctcctccactagccagaattcta
tcacctcagatgagccagcctctggccgtgtctcacatccagacttcgcctctgcttcac
cctttagtgggtcaacacatcctttctgcacgccagtttaccaaggagcagatgtcccac
ttgttcaatgtggctcacacacttcgtttaatggttcagaaagagaggagcctggacatc
ttgaagggtaaggtcatggcctccatgttctatgaggtgagcactcggaccagcagctct
tttgctgcagcgatgcagcggctcggcggctctgttgtgcacttcagcgaatccacttcc
tccacgcagaagggcgagtccctgaccgactcggtgcagaccatgtgctgctatgctgat
gtcattgtgctgcgccatccagtgcctggagctgtagagaaagcggcaaagcattgtcgg
aggccggtaataaatgctggcgatggtgtcggcgagcaccccactcaggccctactcgat
atctttaccatacgggaagagcttggcaccgtcaacggaatgactatcactatggtgggc
gatctgaagcacggcagaactgtgcattcattagccagactgctcacccagtatcgcatc
agcctgcgctacgtgtccccaaagaacctcagcatgccccacgagatcgttgactttgtt
gcatccaaaggcataaagcaggaggagttcagcagtattgaagaggcccttcctgacacc
gatgtcctttacataacacggattcagaaagagcgtttcgcctccgaggaagagtacaaa
gcatgcttcgggaagtttatcttgacccctcatataatgacaggagccaagagaaaaatg
gtggtcatgcacccacttccaagagttaacgagattagtgtggaggtggacacagatcca
cgtgctgcttacttccgtcaggctgagaacgggatgtatatccggatggcacttctcgcc
actgtgctcggtcgctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (14)   
   KEGG COMPOUND (14)   
Chemical reaction (10)   
   KEGG ENZYME (3)   
   KEGG REACTION (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (47)   
   KEGG ORTHOLOGY (1)   
   RefGene (42)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (16)   
   Pfam (16)   
All databases (104)   

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