KEGG   Ictalurus punctatus (channel catfish): 108263589
Entry
108263589         CDS       T04658                                 
Name
(RefSeq) anaphase-promoting complex subunit 1 isoform X1
  KO
K03348  anaphase-promoting complex subunit 1
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04110  Cell cycle
ipu04114  Oocyte meiosis
ipu04120  Ubiquitin mediated proteolysis
ipu04914  Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108263589
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    108263589
   04114 Oocyte meiosis
    108263589
 09150 Organismal Systems
  09152 Endocrine system
   04914 Progesterone-mediated oocyte maturation
    108263589
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ipu04121]
    108263589
   03036 Chromosome and associated proteins [BR:ipu03036]
    108263589
Ubiquitin system [BR:ipu04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   APC/C
    Other subunits
     108263589
Chromosome and associated proteins [BR:ipu03036]
 Eukaryotic type
  Sister chromatid separation proteins
   APC/C complex
    108263589
SSDB
Motif
Pfam: Apc1_MidN APC1_C APC1_3rd ANAPC1 PC_rep
Other DBs
NCBI-GeneID: 108263589
NCBI-ProteinID: XP_017320052
Ensembl: ENSIPUG00000018408
UniProt: W5UMD7
Position
3:8022933..8080182
AA seq 1959 aa
MSNVHEERAAMMIAAGELQPFVPFGREHCQRHPSAVNLQLRQLQPAPELWCSDGTAGLVG
SLQEVSLQEREKESWQLRKGSAVFSDEAEYEEELYVAGHMVIWSRGTKDQASYVYKAFTV
DSPVQQALWCNFIVPQSRKEEKDTVEKCVCIVQSACVNVHSVSGKDFISPLPFQVSFLWP
TKFGLLFERKNLTSDAPLSPSREPLPTLFSMLHPLDEIAPVVCKSAGLFETQRLQYVSDS
ALQVVFSCAEPSIIMTYDTLQCSHTIWALRKVTPEEQATVLKCPSQDGPAQTPTAAPTFL
GAHLRSVSRLDSPGSPLHCHALHNQSRVPTSPTLHSRAHSPNISNMAALSRAHSPGMAAP
SFTGTQRFNVSCHSPSARGHSLQASPNSTLNETALMPEMEPILPDLCIEQLWTETTSSYR
EKSCQASKVFITSDLCENRYLCFLVESHQQLRCVKFLESNETSQLIFASVTSIPAKDAAP
LEDIDALLVLETNNSLVLYTGVTRVSKVYVRGLLSPTFSLPTPLPHLNTVLENVSTPAKA
TVQHMSRLEESDMPSPVSEMRTVQHHESSWLEDSPFQQATPHIQALRDPVSNRLTLELSN
GSMLWITIPEVATSELVKRCLQAIRFILPKDTAMKVLVKWYNIYNAPGGPSMHQEWNLLV
TCLMTLMGYNTERLSWTRNLHFEVPLSPVIAPKKARPADTGSDEDWTYLCTSDYHCQVSV
YPAPGMSDLDTEVSAGIMDESGPAAELDPSALLFTHIPALFYVLHLLYEDLKLDELQRSS
ARALVGLLQQMARDLQQEEYIDLYWRDYPSFIKSFKETCKIDQAQMELMSWPVYLTGEVP
CVFAWLSSCLRGQEVPPFPYLPGICERTKLIVLSYALYVVGDEKAASSNVSKYLSRLSAG
QKKGFGDPALRRQSSVKQSAPTGCLAEKLVVWLTSEGFMLKDLESVPFGVALPIRDAIIQ
CREHPCSDWSEEVCALIGRQDLTKQAHKVSLDKRKPMVALNEPLESPITSEADEEEDGMA
DLHPEVTGLIWSRDLRVQEVRRLLQSSRPVRVNVPHLPEVSDHEYIEEKENKLLQLCQRT
MALPVGRGLFTLFSYHPVPTEPLPVPKLNLTGRAPPRNTTVDLNSGNVDVPPNMASWPSF
HNGVAAGLKIAPASRVESAWIAYNKPKSTELANEYAGFLMALGLNGHLTKLATLNIHDYL
TKGHEMTSIGLLLGVSAAKLGTMDMSVTRLLSIHVPALLPPTSTELDVPHSVQVAAVVGI
GLVYQGTGHRHNAEVLLAEIGRPPGPEMEYCTDRESYSLAAGLALGMVCLGHGSNLIGMT
DLNVPEQLYQYMVGGHRRTHTGINREKHKSPSYQIKEGDTINVDVTCPGATLALAMIYLK
TNNRSIADWLKAPDTMFLLDFIKPEFLLLRTLARCLIMWDEILPNEEWVTSNVPQIIQEN
IGLQEEALVSEDLNMETLVQAHDYIIAGACMAVGFRFAGSANSDAFDCLYKFARNFMKSL
TSTTSTATVSGQYNLQTCLSMVLLATSMVMAGSGNLKVLQLCRFLHKRTFGEMNYGFHMS
HHMALGLLFLGGGRYTLSTSNSAIAALLCALYPHFPAHSTDNRYHLQALRHLCVLAAEPR
LLVPVDVDTLKPCYALLDVTYKETQWYEETTVELMAPTMLPELHLLKQIKVKGPRYWELN
IDLTKGTQHLQSILSRDGVLYVKLRAGQLPYKDDPRGWKSLLAPSVNNRNPEVRTFKPEA
ISTFTSDAALVSFAKYFCEASENMKNKQETVALFSAILYECVTQENPEMLPTHISIDQVV
KALEQGELSETFSLWQMKLVLELCESGILQQRLRDTRRQSRGLLLSSEFLPVMKSSADQA
LDRWLVDNRHVLQEYISRLPTSDDTDSSILACFLVYHSIPSFRKMATTDLGGCASFPELL
LKFSQLGVPVRGLLHLSPLLLHDDGSAISQHFPSEPQRL
NT seq 5880 nt   +upstreamnt  +downstreamnt
atgtcgaacgtgcatgaagagagagctgccatgatgatagccgctggggaactgcagccg
tttgtcccgttcggccgtgagcactgccaacgccacccaagcgccgtgaacctccagctg
cgccagctgcagcctgcccccgagctctggtgctctgacggaactgcgggactggtgggt
tccttgcaggaggtcagcctccaggagagagagaaagagtcctggcagctgaggaaaggc
tccgctgtgttcagtgatgaagccgaatatgaagaggagctgtacgtggccgggcacatg
gtcatctggagccgtgggaccaaggatcaagcttcctatgtgtacaaggctttcactgtg
gacagcccagttcagcaggccctgtggtgtaatttcattgttcctcaatcccggaaagag
gaaaaggacacagttgaaaagtgtgtctgtatagtccaaagcgcatgcgtgaatgtacac
tctgtgagtggaaaggacttcatctccccgctgccatttcaggtctcctttttgtggccc
actaagtttggattgctttttgagcgcaaaaatctcacatctgatgctccattgagcccc
tcaagggagcctcttcccaccctctttagcatgctccaccctctggatgaaatagcccct
gttgtctgcaagtctgcagggctgtttgagacacagcgcctgcagtatgtatctgacagc
gcacttcaagtggtgttctcctgtgctgaaccctccatcatcatgacctacgacacactg
cagtgcagtcatactatctgggctctgcgcaaagtcacaccagaggagcaggctaccgtt
ttgaagtgtcccagtcaggatgggccagctcagacccccacagccgcacccactttcctt
ggcgcccacctgaggagcgtgagccgactggactcccccggctcacccctgcactgccat
gccctgcataaccagagccgtgtgcccacctcacccacactgcactctcgtgcacactcg
cccaatatctccaacatggccgctctcagccgagcccactcccctggcatggcggcacct
tcttttacgggaactcagcgcttcaatgtgtcatgccactcaccgtcagcccgtggacac
agcttgcaggcgtcccccaacagcacgctgaatgaaacagccctgatgcctgagatggag
cccatcctgcctgacctctgcattgagcagctgtggacagagaccactagttcctacagg
gagaagagctgccaggcatctaaagtgttcattacttctgacctgtgtgagaacagatac
ctgtgcttccttgttgaatcccaccagcagctcagatgtgtcaagtttcttgaaagcaac
gaaacttcccaactcatatttgcgtcagttacttccattccggccaaagatgccgcacct
ttggaggacatagatgctttgctagtattagagaccaacaacagcttggtgttatacaca
ggagtcacacgggtgagcaaagtgtatgtccgtggtcttctgtcaccaaccttcagtttg
ccaacccccttgccacacttaaacaccgtgctggagaacgtgagcactccagcaaaagca
actgtccagcatatgagcaggctcgaggagtccgacatgccttccccggtgtcagagatg
agaacagtgcagcatcatgagtcatcatggctagaggattcaccgttccagcaggccacg
ccgcatatccaagccctgcgagacccagtcagcaaccgtctcacactggaactgagcaat
ggctcaatgctgtggatcaccattcctgaagtggctacatcggaactggtgaaacgatgc
ctacaagccatccggttcatcctgcccaaagacacggctatgaaggtgctggtgaagtgg
tacaatatctacaatgctcctggaggtcccagcatgcatcaggagtggaatctgttagtc
acgtgcttgatgacattaatgggctacaacacggaacggctgtcgtggacacgaaatctc
cattttgaagtgcccctctcaccggtaattgctcctaagaaggcacgtccagcagataca
ggctctgatgaagactggacatacctctgtacttcagactaccactgccaggtgtccgtg
tatccagccccaggcatgtctgatctggatacagaagtgtctgctggtatcatggatgag
agcgggccagcagctgagctggacccctcagctctgctcttcacccacatcccagcactt
ttctatgtgctccatctgctttacgaggacctaaaactggacgagctccagcgtagcagt
gcccgtgccctcgtgggcctcctgcaacagatggccagggacctgcagcaggaggaatac
attgatctgtactggcgtgattacccctcattcatcaaaagcttcaaggaaacctgcaag
atagatcaggctcagatggagttgatgagctggccggtgtacctgactggcgaagtgccc
tgtgtatttgcatggctcagcagctgtctgcggggacaggaagtgcctccgttcccctac
ctgcctggtatttgtgaaaggaccaaactgattgtgttgagctatgcgctatatgtagtg
ggagatgaaaaagctgcttcatctaatgtgtctaagtacctgtccaggctctctgcaggg
caaaagaaaggtttcggtgatcctgcccttcgaaggcagagcagtgtaaagcagagcgct
ccaacaggctgtctcgcagaaaaactggtggtgtggttgacctctgaaggctttatgttg
aaagatctggaatcggtgccttttggtgtggcgctgccaatccgagatgccatcatccaa
tgcagagaacatccctgctccgattggtctgaagaggtctgtgctctgattggacgacag
gacttaaccaagcaggctcacaaggtttccttggacaaaagaaaaccgatggtagcacta
aatgagccactagaatctccaataacaagcgaggcagacgaggaagaagacggtatggca
gatcttcatccggaggtgacgggactgatctggagccgtgacctgcgtgttcaggaggtt
cgacgtctcctccaaagctccagacctgtgcgggtcaatgtcccccacctgccggaggtc
agcgaccatgagtatattgaggaaaaggaaaacaagcttctccagctgtgccagcgcacc
atggctctccctgtgggtcgaggcctcttcacactgttttcataccatccagtaccaact
gagcccctgcctgtgccaaaactcaatctgactgggcgagctccacctaggaacaccacc
gtggacctgaacagtggcaatgttgatgtgccacccaacatggcgagctggcccagcttt
cacaacggcgtggcagcaggcttgaagattgcaccagcgtcacgtgttgaatcagcctgg
atcgcctacaacaaacccaagagcactgagctagccaacgagtatgccggcttcctaatg
gcactcggccttaatggccacctcaccaaacttgccacgcttaacatccacgactatcta
actaagggtcatgagatgacgagcatagggctcttgttgggtgtttcagcagctaagctc
ggcaccatggacatgtcggtcacacgcctgctgagcatccatgtccccgccctgctgcca
cccacttccaccgagctggatgtgccacacagtgtgcaggtggctgcagtggtgggcatc
ggccttgtctaccagggtactggacaccggcacaatgcagaggtgctgcttgcagagata
ggccgtcctcccggccctgagatggagtactgcacagacagggagtcctactctctagca
gcaggcctggcacttggcatggtttgcctcgggcatggcagtaacctgatcggtatgacg
gacctgaatgtgccagagcagctttaccaatacatggtgggaggacaccggcgcacacac
accgggattaacagagagaagcacaaatccccaagctaccagattaaggaaggtgacaca
atcaatgtagatgtgacctgccctggtgccaccttggctcttgccatgatctatttaaaa
accaacaataggtctatagctgattggttgaaagccccagacaccatgttcctgctggac
ttcatcaaacctgaatttctgctgctgaggactctggccagatgcctcatcatgtgggat
gagatactgcctaatgaggaatgggtgactagcaatgtgcctcagataatccaagagaac
attggactgcaggaggaagcacttgtatctgaggatctgaacatggaaactttggtacaa
gctcatgattatatcattgctggggcctgcatggctgtgggctttagatttgctggatct
gcaaattctgatgcttttgactgcctgtataagtttgctcgaaacttcatgaagtctctc
actagcaccacgtcaacagccacagtttcggggcagtataacttgcagacatgtctaagc
atggtgcttctggctacttccatggttatggctggctcagggaacctaaaggtacttcag
ctctgccgttttctgcacaagcgtacttttggtgagatgaactacggattccatatgtct
caccacatggccttgggattactctttcttggaggaggcaggtacacactcagcacctcc
aactccgccattgctgcccttctttgtgctctttatcctcacttccctgctcatagcacc
gataataggtatcatctccaggccctgcgtcacctctgtgtgcttgcagctgagcctcgg
ttgcttgttcctgtagacgtggacactctgaaaccctgctacgccctgcttgatgtcacc
tacaaggaaacacagtggtatgaggagacaactgtggaattgatggctcccactatgctc
cctgaacttcatctactgaaacagattaaagtgaagggtccaagatactgggaactaaac
atcgatctgacaaaaggaactcagcatctgcagtccatcctttccagagacggagttctt
tatgtgaagctgcgtgctggacagctgccctataaggatgatcctcggggttggaaaagc
ctgctggctcctagtgtcaacaacagaaacccagaagtgcgcacattcaagcctgaagcc
atttcgacgttcacgtcagacgctgccttggtttcctttgctaagtacttctgtgaagcc
tctgaaaacatgaagaataaacaggagaccgtggccttattctcagctatactatatgaa
tgtgtgacccaggaaaatccggagatgctgcccacccatatctctattgatcaagttgtg
aaggctttggagcagggtgagctgagtgagacgttctccctgtggcagatgaagcttgtg
ctggagctctgtgagagcggaatattacagcagagactgcgggacacgcgcaggcaaagc
cgtggtctgctgctaagttctgagttcctgcccgtcatgaagagctcggccgaccaggcc
ctagaccgctggctcgttgacaacagacatgtgctacaagagtacattagcaggctgccg
accagtgacgatacagacagcagcattctagcctgcttcttggtctaccactcaattcct
agcttcaggaagatggccacaacagaccttggggggtgtgcctctttccctgagctgctg
ttgaagttcagtcagttgggtgttcctgttcgaggccttctgcatctcagtcctttgctc
ttacacgatgatggctctgctatatcgcagcactttccctctgagccccagaggttatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (59)   

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