KEGG   Ictalurus punctatus (channel catfish): 108263710
Entry
108263710         CDS       T04658                                 
Symbol
dctn1b
Name
(RefSeq) dynactin subunit 1 isoform X1
  KO
K04648  dynactin 1
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04814  Motor proteins
ipu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    108263710 (dctn1b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108263710 (dctn1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ipu04131]
    108263710 (dctn1b)
   03036 Chromosome and associated proteins [BR:ipu03036]
    108263710 (dctn1b)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ipu04812]
    108263710 (dctn1b)
Membrane trafficking [BR:ipu04131]
 Endosome - Golgi transport
  Rab GTPases and associated proteins
   Rab associated proteins
    108263710 (dctn1b)
Chromosome and associated proteins [BR:ipu03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Dynactin complex
     108263710 (dctn1b)
Cytoskeleton proteins [BR:ipu04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Dynactins
     108263710 (dctn1b)
SSDB
Motif
Pfam: Dynactin CAP_GLY DUF4407
Other DBs
NCBI-GeneID: 108263710
NCBI-ProteinID: XP_017320262
Ensembl: ENSIPUG00000008635
UniProt: A0A2D0QPD1
Position
3:complement(14084765..14122972)
AA seq 1266 aa
MSQMKRYTYSRTTSSGSSRMSSDGGGRPVKVGSVVEVIGKGHRGTVAYIGNTLFASGKWV
GVILEEARGKNDGTVQGKRYFTCLENHGIFVRQSQIQLVEDGADTTSPDTPDAVTSKVPK
REILEAPKSNKVRGAKPKKTPAPRKTTVRRPKARAGVGVKVGSGSASAGEMSSSEPSTPA
QTPLAAPVIPSPVGTLPSPGAPPIPAPSKEEEALRAQVKDLEEKLETLRMKRAEDKAKLK
ELEKHKIQLEQLQEWKSKMQEQQNELQKQLKEAKKEAKEALEAKEHYMEEMADTADAIEM
ATLDKEMAEERAESLQQEADALKEKVEELTMDLEILKHEIEEKGSDGAASSYHVKQLEEQ
NARLKEALVRMRDLSATEKQEHSKLQKQMEKKNFELETVRVQKEKTQEEMKMAEKTIDEL
KEQVDAALGAEEMVETLTERNLDLEEKVRELREVVTDLEAINEMNDELQENARETELELR
EQLDLSAASVREADKRVEAAQETVADYQQTIQKYRELTAHLQDVNRELMSQQEVTAEPQQ
QPAEIFDFKIKFAETKAYAKAIEMELRKMEVAQANRQVALLTSFMPDSFLRHGGDHDGIL
VLLLMPRLICKAELISKQAQEKFDLTDNCSQRPGMRGGVGEQLSFAAGLVYSLSLLQATL
HKYEYALNQCNVEVYKRVGSLYSEMSVHERSLDFLIDLLHKDQLDETVNVEPLTKAIKYY
QHLYSIHLSDQAENCTVQLADHIKFTQSALDCMAVEVGRLRAFLQVGEEETPFSVLLKDL
HTSCSDIRQFCKKIRRRMPGTDAPGIPAALNFGPQVSETLAESRRQLAWVNAVLQEVAAA
GAQLIAPLGEHEGLPTLKLEDMAFKAAEQIYGSQGINLYECLRQSCSVVIATMNKMATAM
QEGEYDSEKPQTGMAPVEVRAAALRAEITDAEGLGLKLEDRETVIKELKKSLKIKGEELS
EANVRLSLLEKKLDSASKDADERVEKIQTVLDETQALLKKKEKEFEETMDALQADIDQLE
AEKTELRQRINSQSKINIEGLRGSPGSGIASIVTGGITTDDQKGAVGVCAAGGVQVIDSP
LLTQQIEAQRLSIKRLKNENNILKAEKMRTQLASLPPLNVSKLSLREGCRPEVLSSALYR
KTDQLLETLLQMSANVKVVDITGKSPVTPSAQLLEQTARLQSLSETLDRLKDEVAEHVVS
QRPGAQVSSDFATFPCTSFVKAKEEKMRDEVLVGRVMVPCARGQEEVHRLVLSQYQLQRV
HRLLQT
NT seq 3801 nt   +upstreamnt  +downstreamnt
atgtctcaaatgaagaggtacacttatagcaggaccactagcagtggcagcagcaggatg
agttcagatggaggaggacggccagtgaaggtgggctctgtggtggaggtcattggaaag
ggtcatcgtggcaccgtggcctacattggcaatacactctttgcctcggggaaatgggtg
ggagtcatcctagaggaggccagaggcaagaacgatggcacagtgcaaggcaagcggtac
ttcacctgccttgagaaccatgggatatttgtgcggcagtcacagatccagttggtggag
gatggggcagacacaacctcacctgacactcctgatgctgtcacatctaaagtgcctaag
cgggagattctggaagctcccaagtccaataaagtgcgaggagccaaacccaaaaagacg
cctgctcctcgtaagactacggtcaggaggccaaaggctcgggcgggtgtcggagtaaag
gtgggctctggctcagcatcggctggtgagatgagcagcagtgaacccagcacacctgct
caaaccccactggctgctcctgttatcccctcccctgtagggacgctcccttcccctgga
gctccacccatcccagccccgagtaaggaggaggaggctctacgggcacaggtgaaagat
ctggaagaaaagctggagactcttcggatgaagcgagcagaggataaggccaagctaaag
gagctggagaagcacaagatccagctggagcagctacaggagtggaagagcaagatgcag
gagcagcaaaatgaactgcagaaacaactcaaagaggccaaaaaagaagcaaaagaagct
ttagaagcaaaggaacattatatggaggagatggcagacacagcagatgctatcgagatg
gccaccttagataaagagatggccgaggagcgggcggagtctctgcagcaggaggctgac
gcactcaaagagaaggtggaggaattgaccatggacctggagatcctcaaacatgagata
gaggagaaaggctctgatggtgcagcatctagttatcatgtgaaacaactggaagaacaa
aatgcccgtctgaaggaggccttggtcaggatgcgcgacctgtcggccaccgagaaacag
gagcactcaaagctgcagaagcagatggagaagaagaactttgagctggagacagtaagg
gtgcagaaagagaaaacgcaagaggaaatgaagatggcggagaagaccatagacgagctc
aaagaacaggtggatgcagctcttggagcagaagagatggtagagactctaactgagcgt
aatttggacctggaagagaaagtgcgggagctcagagaggtcgttactgacctggaggcc
attaatgagatgaacgacgagctgcaggagaacgccagagagacggagctggagctgagg
gagcagctggatctgagtgcagccagtgtgcgagaggcagacaaacgtgtggaagcggcc
caagagactgtagcagattaccaacagaccatccagaaatacagagagctgaccgcacac
ctgcaggatgtgaacagagagctgatgagccaacaggaggtcactgctgagccacagcag
cagcctgccgagatcttcgacttcaagatcaagtttgcagaaaccaaagcatatgcgaag
gctattgagatggagctgcgtaagatggaagtggctcaggcgaacagacaggtggctctt
ctcacctccttcatgcccgactccttcctgagacacggaggggaccatgatggcatcctc
gtcttgctgctcatgcccagactcatctgcaaggcagagctgatcagtaagcaggcgcag
gagaagtttgatctgactgataactgctctcagaggccggggatgagagggggagtgggg
gagcagctcagctttgctgctggacttgtttactctttgagtttgcttcaggcaacactg
cacaaatatgaatatgcccttaatcagtgtaatgtagaggtatataagcgtgtgggttcc
ctttactctgaaatgagtgtgcatgagcgttctttggacttcctcattgatttgctgcac
aaggatcaattggatgaaactgtgaacgttgagccacttactaaggccattaaatattat
cagcacctttatagcattcatctgtctgatcaggcggagaactgcaccgtgcagctggct
gaccatataaaatttacccagagtgccctggactgtatggcggtggaggtgggtcgtctg
cgtgccttcctgcaggtgggagaggaagaaacaccgttttctgtgctgctcaaagatctg
cacacttcctgtagcgacattcgccagttctgcaagaaaatccgccgccgcatgccgggc
actgacgcgccagggatccccgctgctctcaactttgggcctcaggtgagtgagacactg
gcagaaagcaggaggcagctggcctgggtgaatgctgtactgcaggaggtggctgcagca
ggagctcagctcatcgcaccactcggtgaacacgaaggtctgccaacgcttaaacttgag
gacatggccttcaaagcagctgaacagatctacggctctcaaggtataaacctctacgag
tgtctgcgccagtcctgtagtgtcgtcattgcaaccatgaacaagatggccaccgctatg
caggagggagagtacgactctgagaagcctcagactgggatggctccagtggaggtgcgg
gcggctgcactgagggcagagatcacagatgctgagggactcggcctaaaattggaagac
agagagactgtcatcaaagagctcaagaaatccctcaaaataaagggtgaggagctgagt
gaggccaacgtgcgtctgagtcttctagagaagaagctggacagtgcgtcaaaggacgca
gacgaacgagtggagaaaatccagaccgttctggatgagacccaggcactactaaagaag
aaggagaaggaatttgaagagaccatggatgctctgcaggccgatatagaccaactcgag
gcagagaagacggagctgagacagcgtataaacagccaatcgaagataaacattgaggga
ctcagaggaagtcccggctctggcattgcatccattgtgactggtggcatcacaactgat
gatcagaaaggtgctgtaggagtgtgtgctgctggaggtgtgcaggtgatagattctcca
ctgctgacacaacagattgaagctcagagactcagcataaagcgtctgaagaatgaaaac
aacatcctgaaggcagagaagatgcgtactcagttagcctcgcttcctccgttaaatgtg
tcgaagctgagcttgcgtgaaggttgtagaccagaagtcctatccagcgctctctatcgc
aaaacagaccaacttctggaaacactgctgcagatgagtgccaatgtcaaagtcgtagac
atcactggaaaatcaccagtgactcccagtgctcagctcctggagcagacagcaaggcta
cagtctctcagtgagactctcgacaggctaaaggatgaagtagcggagcacgtggtgtct
cagagacctggtgctcaggtttcgtctgactttgctactttcccttgcacctcattcgta
aaggctaaggaggagaagatgagagatgaagtgttggttggtcgtgtgatggtgccttgt
gctcgagggcaggaggaggttcaccggctcgtgctgtcccagtaccagctgcagagagtg
catcgcctgcttcagacttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (3)   
   Pfam (3)   
All databases (56)   

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