KEGG   Ictalurus punctatus (channel catfish): 108266106
Entry
108266106         CDS       T04658                                 
Symbol
setdb1b
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-B isoform X1
  KO
K11421  [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:2.1.1.366]
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu00310  Lysine degradation
ipu01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    108266106 (setdb1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ipu03036]
    108266106 (setdb1b)
Enzymes [BR:ipu01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.366  [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
     108266106 (setdb1b)
Chromosome and associated proteins [BR:ipu03036]
 Eukaryotic type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     108266106 (setdb1b)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    108266106 (setdb1b)
SSDB
Motif
Pfam: DUF5604 Tudor_4 Tudor_5 SET Pre-SET MBD DUF4537
Other DBs
NCBI-GeneID: 108266106
NCBI-ProteinID: XP_017324604
Ensembl: ENSIPUG00000004536
UniProt: A0A2D0R211
Position
1:10133747..10154473
AA seq 1237 aa
MEVDADLGSALDMELGPELEEELGVSLDELRRWIEEQVDSSEVVLHRKAQLAEMQNWVEQ
KEKDMASMDTLCSSASESVIQCEVLVKELYSNIGLEYRESSSEDEGVGGGNASEVIEIDD
DDEDDDDDDEEDDDDDDVIAVGCVVPPNKNVTPVKDSLMEASAALQRSTQQVQNLMQTVG
KPTPSTAITPTKGLAPPSPSRGSMLNIPAVFMSSGPVHAPTQPNPALKQDVMRLNMSILG
KKRTKTWHRGTLIAINSVGNGFKYKVKFENKGKSLLSGNHVAFDYHPTLERLYVGARVVA
KYKDGNQVWLYAGIVAEMPNSKNRMRFLIFFDDGYASYVALPDLYPVCRPLQKTWEDIED
ESCRDFIEEYITAYPNRPMVLLKPGQIIKTEWEGTWWRSRVEEVDGSLVKMLFLDDKRSE
WIYRGSTRLEPMFNLKMSTASNQEKKLAGQQRVRPNMGAMRVKGPVVQYTNENNILANRS
AVTQTTPPRPQITVPSQPVRTETQMAKKSTSPYVPAARQIVTTDLQLKPVGILPQATSSR
LFFLQSGPVQTLTPIAPAPQTLPPTITAMPAMPAISTISTIAPYAGERIPQEPSYQAPND
RLFYMMHTCTPECLKRIRPTRPNLHRGRNPLLTPLLYEFRRMTARRRLNRKVSLEMSFHV
IYKSPCGLSLRNMAEIQRYLFQTHCDFIFLEMFCLDPYVLVDRRFQPQRPFYFIRDITSG
REDIPLSCVNEIDNTPPPSVAYSKERIPEDGVFINTSVEFLVGCDCTDGCQDKSKCSCHQ
LTLQATGCTPGAQINPNAGYNYKRLDECLPTGIYECNKQCRCNPQMCSNRLVQHGLQVRL
QLFKTQNKGWGIRCLDDVAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVEN
FKEGYESEAHCSDSEGSGVDMSRVKMASSQQGKNGPKTEDRNIRSKGQDSSDEGESDDEK
DESNGDESDSSDDTFVKDTYFSSSSVWRSYTTRRQAKGMKEESQDSKDGLSMSAGGTEDR
KPPPVPEECGKSKVASWLTSQSSSTGAPNVKIEGGQKTEKKEVMTLSDSDDVQTISSGSD
DNKEREKKTQAVVKRQVAVKSTRGIALKSSHGMMVKTGGGGGGGSGGHHSQGGITLDNGS
KSTRQFFDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKR
IRAGTELTWDYNYEVGSVEGKELLCCCGSTECRGRLL
NT seq 3714 nt   +upstreamnt  +downstreamnt
atggaggtggacgcagatttgggctcggccctggacatggagctggggcccgagctggag
gaggagcttggcgtttctctggatgagctgcgcaggtggatcgaggagcaggtggacagc
agcgaggtcgtgctgcaccggaaggcccagttagccgaaatgcagaactgggttgagcag
aaagaaaaggacatggccagtatggacacactctgctccagcgcatcagagtctgtaata
cagtgtgaagttctagtgaaagagctgtacagtaacataggcctggagtatcgggagagc
agctctgaagacgaaggagtaggaggcggcaacgcttccgaggtcatcgaaattgatgac
gacgacgaagacgacgacgacgatgacgaagaagacgacgacgacgatgatgtcattgcc
gtgggctgtgtggttccaccaaataagaacgtaacgccagtcaaagactcgcttatggaa
gcatcagctgcacttcagagatccacgcagcaggtgcagaacctgatgcagacagtcggt
aagccaacgccgtccacggcgatcacgcccactaaaggactggcccctccctctccgtcc
cggggctccatgctgaacattccagcagtgttcatgtcctccggccctgtacacgcaccc
actcaaccaaatccagctctaaagcaggatgtcatgaggctaaacatgagcattctgggt
aaaaaacgcaccaagacctggcaccgtggaactctgatcgctattaactcagtgggcaac
ggctttaagtacaaggtgaagtttgagaataaagggaaaagcctgctgtctgggaaccac
gtggcgttcgactatcacccaacactggagaggctctacgtcggtgctcgtgttgttgcc
aaatataaagatggcaaccaggtgtggctgtacgctggcattgttgctgaaatgcccaac
agcaagaaccgcatgaggttcctgatcttttttgatgatggctatgcttcttatgtagcc
ctgccagatctctaccctgtttgcagacccttgcagaagacgtgggaggatattgaggac
gagtcctgtagggatttcattgaggagtacatcacggcatacccgaacagacccatggtg
ctgctgaagccgggccagatcatcaaaaccgagtgggaagggacgtggtggaggagccgt
gtggaggaagtggacggcagcctcgtcaaaatgctcttcctggatgataagcgcagtgag
tggatctatcgtggctcgactcgcctggagcccatgttcaacctaaaaatgagcacagcc
agcaaccaggagaaaaagctggccggccagcagcgcgtgcggcccaacatgggagctatg
agggttaaaggccctgtggtgcagtacactaacgaaaacaatattctagccaaccgctcc
gcagtcacccagactacaccaccacggccacagattactgttccctcccagcccgtccgc
actgagactcagatggccaagaagagtacgtccccttatgtccctgccgctcgtcagatt
gttaccactgacctccagctcaaacctgtcggcatccttccccaagccaccagctccaga
ctcttcttcctgcagtcagggccagtgcagaccctgacacccatcgctccggctccccaa
accttgccacctaccataactgccatgcctgccatgcctgccatatctaccatatctacc
atagctccctatgcgggcgagcgtattcctcaggagccgtcctatcaggcccctaatgat
cgccttttctatatgatgcacacctgcacacctgagtgtctgaagcgcatccggcccacg
cgacccaacctccaccggggccgaaacccactcctcaccccacttctgtacgagttccgc
cgcatgaccgcgcgccgccgcctgaaccgcaaggtcagtttggagatgtccttccatgtg
atctacaagtccccatgtggcctgagcctgaggaacatggcggagatccagcgctacctc
ttccaaacacactgtgacttcatcttcctggagatgttctgtctggacccatacgtcctg
gtggaccgccgcttccagccacagaggcccttctatttcatccgggacatcacaagtgga
cgcgaggacattccgctgtcctgcgtcaatgagatcgacaacactccgccacccagcgtg
gcttacagcaaagagcgcatccccgaggacggcgtcttcatcaacactagcgtcgaattc
ctggtgggctgtgactgcaccgatggctgccaggacaagtcaaagtgttcatgccaccaa
ctgaccctgcaggccacggggtgtactcccggtgcacagatcaatcccaacgctggctac
aattacaagaggctggatgagtgcttacctactgggatctacgagtgtaacaagcagtgc
cgctgtaatcctcagatgtgctcgaaccgcttggtgcagcacggcctccaagtgcgcctg
cagctctttaagacccagaacaagggctggggcatccgctgcctcgatgacgtggccaaa
ggctcttttgtctgcatctatgcagggaagatccttacggacgactttgcggacaaggag
ggcttggagatgggtgatgagtactttgctaacctggaccatatcgagagcgtggagaac
tttaaggagggttatgagagcgaggcacactgctcggacagcgagggcagcggcgtagac
atgagtcgggtcaaaatggcttcgtcccagcagggcaaaaacggccccaagacagaggac
cgcaacatccgcagcaaaggccaagactcttctgatgagggggagagcgatgatgaaaag
gacgagtcaaacggtgatgagagcgatagctccgatgacactttcgtgaaggacacgtac
ttttcctccagctcagtgtggaggagctacacgacacggcgacaggccaagggcatgaag
gaagagagtcaggacagtaaggatggtctgagcatgtccgccggaggaacagaggacagg
aagccaccccctgtgccagaggagtgtgggaagagtaaagtagcctcatggctgaccagc
cagtcctcctccaccggagcaccgaatgtcaaaatcgagggagggcagaagacggagaag
aaggaggtgatgaccctctccgacagcgacgatgtgcaaacgatcagctctggctctgac
gacaacaaagagcgtgaaaagaagactcaggctgtggtgaagaggcaggtggctgtgaaa
tcgacgcgaggcattgctttaaagtcctcgcatggcatgatggtgaaaacaggaggtggt
ggaggtgggggctcgggaggccatcatagccaaggaggcattaccctagacaatggttcc
aaaagcacacggcagttctttgatggggaggagtcgtgttacatcattgatgccaaactg
gagggcaaccttggacgctacctcaatcatagctgcagtcctaacctgttcgtccagaac
gtgttcgtagacactcatgacttgcgatttccgtgggttgccttcttcgccagcaagaga
atccgtgccggaacagagctgacatgggattataattatgaggtcggcagtgtggaagga
aaagagcttctctgctgctgtggttccaccgaatgccgaggacgactgctctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (7)   
   Pfam (7)   
All databases (55)   

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