KEGG   Ictalurus punctatus (channel catfish): 108268675
Entry
108268675         CDS       T04658                                 
Name
(RefSeq) UV-stimulated scaffold protein A
  KO
K23720  UV-stimulated scaffold protein A
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    108268675
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ipu03400]
    108268675
DNA repair and recombination proteins [BR:ipu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Other TCR factor
      108268675
SSDB
Motif
Pfam: UVSSA_N DUF2043 Augurin DUF1195
Other DBs
NCBI-GeneID: 108268675
NCBI-ProteinID: XP_017329244
Ensembl: ENSIPUG00000016843
UniProt: A0A2D0RH69
Position
8:complement(4490297..4517111)
AA seq 721 aa
MDQEMRDKLSELVEELTTSGEPQLNQAKMKEVKKICKLSNDYIDHFYHLVMTQLNQDHAE
VRFSAFQMAAELFSRSHHFRALLVTNLQEFLELTVETDVEQPLPPPKEVARKLKTQAIQT
VQAWQTTYGEAYKKLALGYHFLKQVKKVDFQDVEARTLAERRRREEKQQRLERIYKGKLE
KAKQEMEEMASEIEDSLTEMNNCMTLIMPDTFNFFSQELTAVSETSTEVSLQDTDVCDEQ
PCCSKDLNKEGGRMAGATKGDEEEEDSSAESDTEEGVDKDVFIRSSGLMSHTYRLDLKVS
SDLNVKETEENEAVVNTMRDLHRLISSRYLPAIQSWIQVFTKVGVEEQLMRRATDLKKSL
EMVLRKHDELHIDYKARQRRVLKAGEEDDDDFEEVPEKEGYEPHIPEHLRAEYGLDPISS
PSTSVAELKPSKPVERPIAPPMPSTLGRLKSRRYEEELDPTCAAATLRILKEKVATATCT
SVSGGSPEPATSCSSEQTEEKEKAPVVSFGLDLYYWGEEQPTAGKIIKNISQHQFWVPHE
VEEEVENEELSAQMKSRYITFAGRFQPVEHKCKAPLPNGSLCERQDRVKCPFHGLIIPRD
EIGRPVNPEDAARLEKEEYKRREEQPDWRDPELMREIEAATGEDLGSSKTYGKGKKAGKG
KGKKRKHPNLTDLKQTANTSRSRLEKKVFNKSSMKRIAAVMNKMDTRKHEKFANQFNYAL
K
NT seq 2166 nt   +upstreamnt  +downstreamnt
atggatcaagaaatgcgggataagctgtccgagttggtggaggagttgactacctctgga
gaaccccagctgaatcaagcaaaaatgaaagaagtgaagaagatttgcaagctttccaat
gactacatcgatcacttctatcacctcgtcatgacccagctaaatcaggatcacgctgag
gttcgcttctctgccttccaaatggctgctgagcttttcagccgttctcatcacttcaga
gctctcttggtcactaacctgcaggagttcctggagctaacggtagagacagacgttgag
cagccgttgcctcccccgaaagaagtagccaggaagctgaagacccaagccatccagact
gtacaggcctggcagaccacgtatggggaagcctacaagaagctggctttgggttatcat
tttctgaagcaagttaaaaaggtagactttcaggatgttgaagcaagaacactggctgag
cgacggagacgggaggaaaaacagcaaagactggagcgaatttataagggaaagcttgaa
aaggccaagcaagagatggaagaaatggcttccgaaattgaggactctctgaccgagatg
aacaactgcatgaccttgatcatgccagacactttcaatttttttagccaagaactgaca
gcggtcagtgagacgagcactgaagttagtctccaggacacggatgtctgcgatgaacag
ccttgctgcagcaaagaccttaacaaagagggtggaaggatggcaggggcaactaaaggt
gacgaggaagaagaggactccagtgcagagagcgacacggaggagggtgtggacaaggat
gtgtttatccgcagctctgggctgatgtcccacacctatcggctagatctgaaggtgtcc
tcagatttgaatgtgaaagagactgaggagaatgaagcagtagtgaacaccatgagagat
ctgcacagactcatcagtagtagatacctccctgccatccaatcctggattcaggttttt
acaaaagttggtgtggaggagcagctgatgaggcgagccacggacctaaaaaaatctctc
gagatggttttgaggaaacatgatgagcttcatatagactacaaagcaaggcagagaaga
gtgttaaaggctggagaggaggacgacgatgattttgaagaggtgccggagaaggagggt
tatgagccacatatccccgagcatctgcgggccgagtacggtcttgatccgatatcttct
ccatccacctctgtggctgaactaaagccatcaaagccagtggagagacctatagctcca
cccatgccctcaactctcggccggcttaagagcaggagatatgaagaagagctggaccct
acatgtgcagctgccacgctgcgtatcctaaaagagaaagtggccacggcaacatgtaca
agtgtgtctggaggctctcctgaacccgccacgagctgcagcagtgaacagacggaggag
aaggagaaagctcctgtcgtttcttttggtctggacctctactactggggagaggagcaa
cccacagctggcaagatcatcaagaacatctcccagcaccagttctgggtgcctcacgaa
gtggaggaggaggttgagaacgaagagctgtctgcacagatgaagtccaggtacattacc
tttgctggacgtttccaacctgtagagcacaagtgcaaagccccgctgcctaacggctca
ttgtgtgaacgccaggacagagtcaagtgtccgttccatgggttaataattcctcgggat
gagatcgggaggccggttaatccagaggatgcagctcgtctggagaaggaagagtataaa
cgcagagaggagcagccagactggcgagacccagagctcatgagggagattgaagcagct
acgggtgaagatctgggctcttctaaaacttacggaaaaggcaaaaaggctgggaaagga
aagggaaagaaaaggaagcatcccaacctcacagacctgaagcaaaccgccaatacttct
cgctcaaggctagaaaagaaggtctttaataagagctccatgaaacgaatagcggcggtg
atgaacaagatggacacgaggaagcatgagaaattcgccaaccagtttaactacgcctta
aaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (38)   

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