KEGG   Ictalurus punctatus (channel catfish): 108272371
Entry
108272371         CDS       T04658                                 
Symbol
cacng6a
Name
(RefSeq) calcium channel, voltage-dependent, gamma subunit 6a isoform X1
  KO
K04871  voltage-dependent calcium channel gamma-6
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04010  MAPK signaling pathway
ipu04260  Cardiac muscle contraction
ipu04261  Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    108272371 (cacng6a)
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    108272371 (cacng6a)
   04261 Adrenergic signaling in cardiomyocytes
    108272371 (cacng6a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ipu04040]
    108272371 (cacng6a)
Ion channels [BR:ipu04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   108272371 (cacng6a)
SSDB
Motif
Pfam: Claudin_2 PMP22_Claudin
Other DBs
NCBI-GeneID: 108272371
NCBI-ProteinID: XP_017336235
Ensembl: ENSIPUG00000008942
UniProt: A0A2D0S1C2
Position
12:19389884..19394759
AA seq 272 aa
MWSTFVVQDEEARSTAISGRGTEALSGMLGVQSGGCKRRTRVTSSSLSEQQEGKIKLVFL
VATVGITLTLLGVGTEFWVELASSKNLYNNETCLAAYYGLWKSCMKKFWVADVDPERETC
GPIDLPGESNCTYFKIYTTGENIVLFHKVPAKNLTVITAMLATFSLFLMVMGALCIIMAL
NKGVQFFLKPASVCFTLSGLLVFLSIIIFHQSVLSFLASDHSIPLHHELSWSVACMGCAG
ALLVVAGVLLLLLALPYSSWGKCLPNRNTASS
NT seq 819 nt   +upstreamnt  +downstreamnt
atgtggtccaccttcgtcgtgcaggacgaggaggccaggtccacagccatatctggcaga
gggactgaagcactatcaggaatgttaggtgtgcaaagtggaggatgcaagcggcggaca
agagtgacctcatcttccctaagtgagcagcaggaaggcaagatcaagctagttttcctt
gtggctacagtgggcatcactctgactctcctaggggtgggcacagagttctgggtagag
ctggcatcatcaaaaaacctttacaacaacgagacatgcctagctgcatactatggcctg
tggaagagctgtatgaagaaattttgggttgctgatgtcgaccctgagcgggaaacctgt
gggcctatcgacctacctggagaatcaaattgcacctatttcaagatctatacaactgga
gaaaacattgtcctgtttcacaaagtgccagcaaagaatttgactgtaatcactgccatg
ctggccaccttcagtctttttctgatggtgatgggagctctttgcattatcatggcatta
aacaaaggcgtgcagttcttcctgaagccagcctcagtatgtttcacattatcaggtctc
ctggttttcctgtctatcatcatttttcatcagtcagtcctttcatttttagcaagtgac
cactccataccattgcaccatgaactgtcatggtcagtagcatgtatgggatgtgctggc
gccttactagtagttgcaggggttttactccttcttcttgctctaccatacagttcttgg
ggaaaatgtctgcctaacaggaacactgccagctcgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (10)   
   UniProt (1)   
   RefSeq(pep) (9)   
DNA sequence (9)   
   RefSeq(nuc) (9)   
Protein domain (2)   
   Pfam (2)   
All databases (33)   

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