KEGG   Ictalurus punctatus (channel catfish): 108273489
Entry
108273489         CDS       T04658                                 
Symbol
gabrz
Name
(RefSeq) gamma-aminobutyric acid type A receptor subunit zeta isoform X1
  KO
K05189  gamma-aminobutyric acid receptor subunit pi
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    108273489 (gabrz)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ipu04040]
    108273489 (gabrz)
Ion channels [BR:ipu04040]
 Ligand-gated channels
  GABA-A
   108273489 (gabrz)
SSDB
Motif
Pfam: Neur_chan_LBD Neur_chan_memb BBL5
Other DBs
NCBI-GeneID: 108273489
NCBI-ProteinID: XP_017338237
Ensembl: ENSIPUG00000017975
UniProt: A0A2D0S688
Position
13:14495228..14520161
AA seq 446 aa
MCSCSPLGSLVFLLLISRIIQTSNSSGEEVLPPTIQKLMQGYNKYLRPLFGNGPVTVGMS
LDIASIDTISEINMDYTATIFLRQRWTDERLCFDGNKSLSLDGRLVELLWVPDTFIVDSK
KSFLHDITVENRLIRIFPNGTVLYALRITTTVACSMDLTKYPMDKQTCTLQLESWGYNVK
DVVFHWTRGNLSVSGLDTLQLAQYTLEDYYTSESEAVYETGRYPKLIFHFQLRRSILYFI
LETYVPSSALVVLSWVSFWISQSSVPARICIGVTTVLTMTTLMMGARTSLPNANCFIKAI
DVYLGICFSFIFGALIEYAVAHFCTLHQPNAANAYMYGQEMQEREDEMNGIVTSIGSQAL
RVRKREEMLSRAGSTSSPTRSDTKEEKSSQPKSGCTKSLSLLRRIVCFLNCCHVENPHYI
DNYSRLTFPLSFIFINLLYWTYYLYF
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgtgttcatgcagccctctgggctctttagtctttcttcttctcattagcaggatcata
cagacttcaaactccagtggtgaagaggtcctacctcccaccattcagaaactgatgcag
ggctacaacaagtacctgaggcctttattcggaaatggtcctgttactgttggcatgagt
ctggacattgccagcattgatactatatcagagatcaacatggactacacagcaactatc
ttcttgcggcaacgctggacagatgagcgtctgtgctttgatggcaataagagcctgagt
ttggatggcaggctggtggagcttctctgggttcctgacacattcattgtggactccaaa
aaatcctttctgcatgacatcactgtggagaacagactcatcaggatattcccaaatggc
accgtgctttatgccctgagaatcaccaccacagtcgcctgcagtatggacctcaccaag
tatcccatggataaacaaacatgcacacttcagctagaaagctggggttataatgtgaaa
gatgtggtgtttcattggacacgtggcaacctgtcagttagtggtcttgatacccttcag
ctggcccagtacacactagaggactactatacctcagagtctgaagctgtgtatgagaca
ggcaggtacccaaagctgatcttccactttcagctgaggcgaagcatcctttacttcatc
ctggagacgtatgtgccatctagtgccctggtggttttgtcttgggtctctttctggatc
agtcagtcctctgtacctgctcgcatttgcataggggtaacaacagtcctgacaatgacc
actctgatgatgggtgcacgcacttctctgcccaatgctaactgcttcattaaagccatt
gatgtgtacctgggcatatgcttcagcttcatctttggtgccctcatagagtatgctgtg
gcccatttctgtactttacaccagccaaatgctgccaatgcatatatgtatggacaggaa
atgcaggaacgtgaggatgagatgaatgggattgtcacatcaatcggcagccaggctttg
cgggtacgcaaaagggaggagatgctgtcccgtgctggcagcactagcagccccactcgt
agtgacactaaagaggagaagtcctctcagcccaagagcggctgcaccaagtctctgtca
cttctgcgtcgcattgtgtgcttcctgaactgttgccatgtggaaaacccacactacatt
gacaactactcacgtctgaccttcccactctccttcatcttcattaatctgctctactgg
acctactacctgtacttttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (36)   

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