KEGG   Ictalurus punctatus (channel catfish): 108273830
Entry
108273830         CDS       T04658                                 
Symbol
rac1a
Name
(RefSeq) ras-related C3 botulinum toxin substrate 1
  KO
K04392  Ras-related C3 botulinum toxin substrate 1
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04010  MAPK signaling pathway
ipu04145  Phagosome
ipu04148  Efferocytosis
ipu04310  Wnt signaling pathway
ipu04370  VEGF signaling pathway
ipu04510  Focal adhesion
ipu04520  Adherens junction
ipu04530  Tight junction
ipu04620  Toll-like receptor signaling pathway
ipu04810  Regulation of actin cytoskeleton
ipu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    108273830 (rac1a)
   04310 Wnt signaling pathway
    108273830 (rac1a)
   04370 VEGF signaling pathway
    108273830 (rac1a)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    108273830 (rac1a)
   04148 Efferocytosis
    108273830 (rac1a)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    108273830 (rac1a)
   04520 Adherens junction
    108273830 (rac1a)
   04530 Tight junction
    108273830 (rac1a)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    108273830 (rac1a)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    108273830 (rac1a)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108273830 (rac1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ipu04131]
    108273830 (rac1a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ipu04147]
    108273830 (rac1a)
   04031 GTP-binding proteins [BR:ipu04031]
    108273830 (rac1a)
Membrane trafficking [BR:ipu04131]
 Exocytosis
  Small GTPases and associated proteins
   Rho GTPases
    108273830 (rac1a)
 Endocytosis
  Lipid raft mediated endocytosis
   Arf6-dependent endocytosis
    108273830 (rac1a)
  Macropinocytosis
   Ras GTPases
    108273830 (rac1a)
 Others
  NADPH oxidases (Nox) and associated proteins
   Nox associated proteins
    108273830 (rac1a)
Exosome [BR:ipu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108273830 (rac1a)
  Exosomal proteins of other body fluids (saliva and urine)
   108273830 (rac1a)
  Exosomal proteins of colorectal cancer cells
   108273830 (rac1a)
  Exosomal proteins of bladder cancer cells
   108273830 (rac1a)
GTP-binding proteins [BR:ipu04031]
 Small (monomeric) G-proteins
  Rho Family
   Rac/Cdc42 [OT]
    108273830 (rac1a)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU CagD
Other DBs
NCBI-GeneID: 108273830
NCBI-ProteinID: XP_017338910
Ensembl: ENSIPUG00000006360
UniProt: A0A2D0S9K1
Position
13:9928714..9936589
AA seq 192 aa
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPMILVGTKIDLR
DDKDTIEKLKEKKLTPITYPQGLAMAKEIGSVKYLECSALTQRGLKTVFDEAIRAVLCPP
PVKKPKPKCLVL
NT seq 579 nt   +upstreamnt  +downstreamnt
atgcaggccataaagtgtgtggtggtcggagacggggcagtcggaaaaacatgccttctg
atcagctacaccaccaacgccttccccggagaatacatccccacagtgtttgataactat
tctgcaaatgtgatggtagatgggaagccggtgaacttggggctgtgggacacagcagga
caggaggactatgacagactcaggcctctctcctatcctcaaacggacgtgtttttaatt
tgcttctcgctggtgagccctgcctcgtttgagaacgtccgtgccaaatggtatcctgag
gttagacatcactgccccaacaccccaatgattcttgttgggaccaagatcgacctaaga
gacgacaaggacactattgagaagctgaaagaaaagaaactcactcccattacttaccca
caaggccttgctatggctaaagaaataggttctgtgaaatatctggaatgctcagcctta
actcagcgtggccttaagacggtgttcgacgaagccatccgcgcagtcctgtgcccaccg
cccgtcaaaaagccgaagccgaagtgccttgtcctctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (11)   
   KEGG PATHWAY (11)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (63)   

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