KEGG   Ictalurus punctatus (channel catfish): 108276335
Entry
108276335         CDS       T04658                                 
Name
(RefSeq) microphthalmia-associated transcription factor isoform X1
  KO
K09455  microphthalmia-associated transcription factor
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04137  Mitophagy - animal
ipu04916  Melanogenesis
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    108276335
 09150 Organismal Systems
  09152 Endocrine system
   04916 Melanogenesis
    108276335
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ipu03000]
    108276335
Transcription factors [BR:ipu03000]
 Eukaryotic type
  Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
   Ubiquitous bHLH-ZIP factors
    108276335
SSDB
Motif
Pfam: MITF_TFEB_C_3_N HLH DUF3371
Other DBs
NCBI-GeneID: 108276335
NCBI-ProteinID: XP_017343415
Ensembl: ENSIPUG00000017300
UniProt: A0A2D0SMB0
Position
15:26237754..26252469
AA seq 452 aa
MQAESGIVPDLEVDEEFTEEPKIYYELKSQPIKHSTPQSDQQCLSLSCLSSSRVLLRQQL
MREQLHDQERREKQRRSHAPPTSTQSSTPYLTQSPAIDVSTPVAPPTSALVPPEVLRVKT
HLENPTKYHLQQAQRQQVKAYLSTTLGPFPSMPCVTQASDSRGIPAGQVNSAPNSPMALL
TLNSTCEREMDDVIDDIISLESSYSDDILGMPLDPALHMANMMPLSVNMMDVYNNQSLAP
PPISVSTSCPENLPNVKRDFCDADTHALAKERQKKDNHNLIERRRRFNINDRIKELGTLI
PKSNDPDMRWNKGTILKASVDYIRKLQRDQQHAKELETRQKNLEITNRHLMLRVQELEMQ
ARAHGLVPSPLCSPEHSAHPIKQEPMLVDCDTPTEGYITTSDPEAYGVMVKTTAAKLGDV
LMETKLPLITSLSPKNSSSKSSISMEENERTC
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgcaggcggagtccgggatcgttccggacctggaggtcgatgaggagtttaccgaggaa
ccgaaaatttattacgaactgaagagtcagccaatcaaacacagtacgcctcagtcagat
cagcagtgtttatctctctcctgtctctcctcgtcccgtgtcctcctgcgtcaacagttg
atgcgtgagcaacttcatgatcaggagagaagggagaagcagcgtagaagccatgccccg
cccacttcaacacaaagctctaccccatacctcacccagagccctgccattgatgtcagc
acccctgtggccccgcccaccagtgcacttgtcccccctgaagtgctgagggtaaagacc
catttagaaaaccctactaagtatcacctccagcaggctcagagacagcaggtgaaagca
tacctatcgaccacgctcggcccgtttcccagcatgccctgtgtcactcaggcctctgac
tccaggggaattccagccggtcaggtgaacagcgcccccaacagccccatggctttactc
accctcaactccacctgtgagagagagatggatgatgtaattgatgacatcatcagtttg
gagtcaagttacagtgatgacatactggggatgccgctggaccccgcccttcacatggcc
aacatgatgccattgtcagtgaatatgatggatgtttataacaatcagagtttagctccg
ccccccatctccgtcagcacttcctgccctgagaacctgcccaacgtgaagagggacttc
tgtgatgcagacactcacgctctcgcaaaggaacgacagaaaaaagacaaccacaacctg
atcgagaggagacggcgcttcaacatcaacgaccgcattaaagagcttggcaccctcatc
cccaaatccaatgacccggacatgcgctggaacaagggcactatactgaaggcgtcagtg
gactacatcaggaagctgcagagggatcagcaacacgccaaagagctggagacccggcaa
aagaacctggagatcactaaccgccacctgatgttgcgggtacaggagttggagatgcag
gctcgagctcatggactcgtcccctcgcctctctgctctccagaacattctgctcatcca
atcaaacaggagccgatgctggttgactgcgatacacccacagaaggctacatcacgacc
tctgaccctgaggcctacggggtcatggtgaagacaacagctgccaaactaggtgacgtg
ctgatggaaacgaagttgccattaataacaagcctttcgccaaagaacagcagcagcaag
agtagcattagcatggaggagaatgagcgcacatgctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (31)   

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