KEGG   Ictalurus punctatus (channel catfish): 108276615
Entry
108276615         CDS       T04658                                 
Name
(RefSeq) katanin p60 ATPase-containing subunit A-like 2 isoform X1
  KO
K07767  katanin p60 ATPase-containing subunit A1 [EC:5.6.1.1]
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ipu04812]
    108276615
Enzymes [BR:ipu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.1  microtubule-severing ATPase
     108276615
Cytoskeleton proteins [BR:ipu04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     108276615
SSDB
Motif
Pfam: AAA AAA_lid_3 LisH RuvB_N AAA_16 TIP49 AAA_5 AAA_14 AAA_22 Mg_chelatase AAA_24 RNA_helicase AAA_7 AAA_28 IstB_IS21 AAA_18 AAA_17 Parvo_NS1 AAA_25 nSTAND3 DUF815 AAA_33 NACHT bpMoxR AAA_2
Other DBs
NCBI-GeneID: 108276615
NCBI-ProteinID: XP_017343909
Ensembl: ENSIPUG00000024858
UniProt: A0A2D0SMH5
Position
16:20785872..20797458
AA seq 541 aa
MSCRNTMELSYQAIKTANQARETDELRTETRRRNMLILIYHHLMEEGYADAASALEKETN
FGLRRFEVCDNVDLDTVLMEYESFYFIKFQKYPKLTKKLPEQGENGRVRNSGKKRTSSVT
KTLPRIACVQQPQSGNGIKKQESKAAGKDWSGTENGGSYLPERNEFGLNVSPIVRNGAGE
GTQMKKGQLLDYRGLIQDAIKGTCNETAANSLSCHPDPSERLLKPISAFCGMNSEMRELA
AVISRDIYLHNPNVHWDDIIGLEAAKRLVKEAVVYPIKYPQLFTGILSPWKGLLLYGPPG
TGKTMLAKAVATECNTTFFNISASSIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELES
VMGQRGAGPGGEHEGGRRMKTELLVQMDGLARSNDLVFVLAASNLPWELDHAMLRRLEKR
ILVGLPSSPARKAMINHWLPPVSNTGGVELRTELAYDVLAEETDGYSGSDIRLVCKEAAM
RPVRKIFDTLENHSEGHSHMLLIKLETVTTEDFLQVIAHTKPSARKLTERFSAWEREYES
V
NT seq 1626 nt   +upstreamnt  +downstreamnt
atgtcctgcagaaacacaatggagttgtcctatcaagctatcaaaactgcaaaccaggca
agagaaacagacgaattaagaacagagaccagaagaaggaatatgcttatattaatttat
catcatttaatggaggaagggtatgcggatgctgcgagtgcactggaaaaagagaccaat
tttgggttgcgtaggtttgaagtgtgtgataatgttgacttggacacagttctcatggag
tatgaaagcttttatttcattaaatttcagaaatatcccaagctaacaaagaaactgcca
gaacaaggtgagaatggacgtgttagaaactccggtaagaagaggacctcaagtgtgaca
aaaacgctgcccagaatcgcatgtgttcagcaaccacagtccgggaacgggattaaaaag
caagagtctaaggcagcagggaaggattggtctggcactgagaacggaggatcatatctc
ccagagaggaacgagtttggcctcaatgtgtcacccatcgttaggaatggagctggcgag
gggacgcagatgaagaagggtcaactgttggactacaggggtctcattcaggatgctatt
aaaggaacgtgtaatgaaacagcggcaaacagcttgtcctgccaccctgatccttcagag
cggctgctcaaacccatcagtgccttctgtgggatgaacagcgagatgagagagctagca
gccgtcattagcagagatatctatttacacaaccccaacgtgcactgggacgacattata
ggcctggaggctgccaagcgattagtcaaagaggctgtcgtctaccccattaagtaccct
caactgttcacaggaattctctcaccatggaaaggtttgctgctttacgggcctccaggc
acaggaaagactatgctggcaaaagcagtagctacagaatgcaacacaacattctttaac
atctctgcatccagcatcgtgagcaaatggagaggagattctgagaagctggttcgggtt
ttatttgagttggcgagatatcatgctccatccaccatctttctggatgagctggagtca
gtgatgggccagagaggtgctggaccagggggtgagcatgaaggtggcaggaggatgaag
acagagctcctggttcagatggatggactggcacgttctaacgacctggtttttgttctg
gctgcctcaaatctaccctgggagctggaccatgcaatgctgagaagactggagaagagg
atcctcgtgggtctgccttccagtccagccagaaaggcaatgatcaatcactggcttcct
ccagtcagcaatacaggaggggtggagcttcgaactgagctagcctacgatgtacttgca
gaggaaacagatggttactccggctcagatatcaggctggtctgtaaggaagcggcgatg
aggccggtcaggaagattttcgacaccctagaaaatcacagtgagggtcacagccacatg
ctgcttattaagctagaaacagtgaccacggaagatttcctgcaggtcatcgctcacacc
aaaccatcagccaggaagctgacagagagattctctgcctgggagagagagtacgagtct
gtctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (25)   
   Pfam (25)   
All databases (44)   

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