KEGG   Ictalurus punctatus (channel catfish): 108279397
Entry
108279397         CDS       T04658                                 
Name
(RefSeq) unconventional myosin-Vb isoform X1
  KO
K10357  myosin V
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    108279397
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ipu03019]
    108279397
   04131 Membrane trafficking [BR:ipu04131]
    108279397
   03029 Mitochondrial biogenesis [BR:ipu03029]
    108279397
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ipu04812]
    108279397
Messenger RNA biogenesis [BR:ipu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Cargo complex
     108279397
   mRNA cycle factors
    P-body specific factors
     108279397
Membrane trafficking [BR:ipu04131]
 Others
  Actin-binding proteins
   Myosins
    108279397
Mitochondrial biogenesis [BR:ipu03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Retention of mitochondria
    108279397
Cytoskeleton proteins [BR:ipu04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Myosins
     108279397
SSDB
Motif
Pfam: Myosin_head DIL IQ Myosin_N MYO6_lever AAA_22 nSTAND3 Ac76 AAA_16 Peroxidase_2
Other DBs
NCBI-GeneID: 108279397
NCBI-ProteinID: XP_053543668
Ensembl: ENSIPUG00000001724
UniProt: A0A9F7RVA1
Position
18:18031351..18107438
AA seq 1814 aa
MTTDQELYVKYTRVWIPDPEEVWKPAEIIKDYKEGESVLHLKLEDESTLPYPIGPKDNPL
PFLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLPIY
GEEVINAYSGQNMGDMDPHIFAVAEEAYKQMGRDEKNQSIIVSGESGAGKTVSAKYAMRY
FATVGGSASDTNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDRRYHIIGANM
RTYLLEKSRVVFQAEDERNYHIFYQLCASASLPEFKDLALNSAEDFTYTSLGQNIVIPGV
NDAVDLEKTREALTMLGVKESHQMSIFKIIASILHLGNVDIVSERDKESCHIPRNDPHLL
HFCELLGIEQDQMENWLCHRKLATATETYVKNMSSAQANTARDALAKHIYAHLFDWIVEH
INKALHTSTKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNSHVFKLEQEEYM
KEQIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWVQKLYSRHTSSEHFE
KPRMSNTSFIVVHFADKVEYQCDGFLEKNRDTVYEEQINILKASKFQLVADLFQDEKGAP
VSAGKTSKINVRPAKPMPKSHNREHRKSVGTQFRSSLHLLMETLNATTPHYVRCIKPNDV
KEAFVFDSKRAVQQLRACGVLETIRISAAGYPSRWTYPDFFNRYRVLMKKKDVTTDKKQV
CRNLLETLVKDPDKFQFGKTKIFFRAGQVAYLEKLRADKFRFACIKMQKTVRGWLQRRRY
QKIRKSTILLQRYGRGFLARRYAELLRLTRAALICQKQYRMVRVRKAYLTIRKATITIQA
FTRGMFTRRLYQEYVLHHKASVIQRTVRGWLQRRKFLRARNAAVVLQCAYRRVLAKRQLK
QLKIAARTAEHFKDLNVGMENKIVQLRRKMDTQKHEYKVQSEKLSEANTALVTEVSKLQK
ELETARNRKGETTQLSSLQDELEKLRAELQEAHAQRKKLEEEHSTEKLGLEQRVQELERE
NSLLKDEKEAMNQKILRQSQSSGGKGGSLSQKEASLQAELDEERLRYQNLLKEFSRLEQR
CDNLQEEATYAKFVPGHRRSPSIQSSLGSDSTFPSISMSEVGDTEDTIQQVEDMGLEKAA
NDISVFMKLQKRVRELEQERKRLQTNLEKMEELGKHKAIEANSSTSEADTNADLAYNSLK
RQELESENKKLKNDLNELRKALADRASENCSSNEPQDSYNVLLNQLKAANEELDIRKEEV
LMLKTQIVSTAKPSENTNHINSNEIIWDNSKKPVDKEEVLQGYQGLSESKRLLEAQLQSQ
NRKHKDELEALHTQIEVMKVDLEKKQEMLNHFSTLPPDALVEFSVQQEITRLTNENLDLK
EIMEKLEKNERKLKKQLKIYIKKVQELEASQAAANRPKLVRQVTVQRKEKDFEGMLEYYK
EDEALLVRMLISDMKPQDVSATVPCLPAYILFMCIRHADYINDDQKVHSLLTSTINAIKK
LLKKNSEDFEMTSFWLANTSRLLHCLKQYSGEEAFMTQNTPKQNEHCLKNFDLAEYRQVL
SDLSIQIYQQLVRIAEGMLQPMIVSAMLESGSLTGVKPMGYRNRSSSVDCDSGGPSSYTL
EVLIKQLGQFYTLMSDHGLDPEIIQQVVRQLFYSINAVSLNNLLLRKDVCSWSTGMQLRY
NISQMEEWLRGRNLHQREVMLTIEPLIQAAQLLQVKKKTSQDAEAICSMCNILSMQQIVK
ILNLYTPLNEFEERVTVSFIRDIQNLLQGRTENNLLLVDTKHTFPVLFPYTPSALSLETM
HIPASLNLDFLVRV
NT seq 5445 nt   +upstreamnt  +downstreamnt
atgacgactgaccaggagctctacgtcaagtacactcgggtttggatccccgacccagag
gaggtgtggaagcctgctgagattattaaagactacaaagaaggagagtctgtcttgcac
ctcaaactcgaagatgaatcgacattgccatatccaatcggtcctaaagacaacccgctg
ccattccttcgaaaccctgacatactggtgggagagaacgacctcacggccctcagctac
ctgcatgaacctgcggtgctgcacaacctcaaggttcgcttcctggagtccaaccacatc
tacacctactgtggtattgtactggtggccattaatccatacgagcagctgccgatttat
ggcgaggaggtcatcaatgcctacagcgggcaaaacatgggtgacatggaccctcatata
ttcgccgtggcagaggaggcttataaacagatgggcagagatgagaagaaccagtcgatc
atcgtgagtggagagtcaggagctgggaagacagtctccgctaaatacgccatgcgctac
ttcgccactgtgggaggatccgccagtgacacgaatgtggaggagaaagtgctggcgtcc
agccccatcatggaggctatcggaaatgcgaagacgacacgtaacgacaacagcagccgc
ttcgggaaatacatccagatcggctttgacaggaggtatcacatcatcggtgccaacatg
cgcacgtatttgctggagaagtccagagtggtgtttcaggctgaggatgaaaggaactac
cacatcttctaccagctgtgtgcctctgcctcgctccccgagttcaaagacctggccctg
aacagtgcagaagacttcacttacacctctctgggtcagaacatcgtcattccgggggtt
aatgatgctgtggacttggagaagacacgggaagccctgaccatgctgggtgtgaaggag
agccatcagatgagcatcttcaagataatcgcctccatattgcaccttgggaatgtggac
atagtttctgagagagataaagagtcatgccatatccccagaaacgaccctcaccttctc
catttctgtgagctgctggggatcgagcaggaccagatggaaaactggctgtgccataga
aagttagccacggcaaccgagacctacgtgaaaaacatgtccagcgcccaggctaatacc
gcccgcgacgctctggccaaacacatatacgcccatttgttcgactggatcgtggagcac
atcaacaaagccctgcatacctccaccaaacagcactccttcatcggagtgttggatatc
tatggatttgaaacgtttgagattaacagcttcgagcaattctgcatcaactacgccaat
gagaaacttcagcaacagttcaactctcatgtttttaaactggagcaagaggagtacatg
aaggagcaaatcccatggacgctcatcgacttttacgacaaccagccttgcattgaccta
atcgaggccaagctcggtatcctggacctgctggatgaagagtgcaaggtacccaaagga
accgatcagaactgggtgcagaagctgtacagccgccacacaagcagcgaacacttcgag
aagccgagaatgtccaacacgtcgttcatcgtggtccactttgcggataaggttgagtat
cagtgtgatggtttcctggaaaagaacagggacacagtgtatgaagaacagatcaacatc
ctgaaggccagcaagttccagctggtggcagatctcttccaggatgaaaaaggagctcct
gtttcagcaggaaaaacctccaagatcaacgtacgtcctgctaaacccatgccgaaaagc
cacaaccgcgagcaccgcaaatctgtaggcactcagtttcggagttccttacatcttctg
atggagactctgaatgctacaactccgcactacgtacgctgcataaaacctaacgacgtc
aaagaagcctttgtgtttgattccaaaagagccgtccagcagctacgagcatgtggtgtt
ctggagaccattcgcatcagtgctgcaggatatccatccaggtggacgtacccagatttc
tttaacagataccgggtgctgatgaagaagaaggacgtgaccactgataagaagcaggtg
tgcagaaacctgctggagactctggtcaaggacccagataagttccagttcggaaagact
aagatcttcttccgagccggtcaggtggcgtacctcgaaaagctcagagccgacaagttc
cgtttcgcctgcattaagatgcagaagacggtgcgaggatggctgcagaggagacgctac
cagaagatccgcaagtccaccatcttgctgcagagatacggccgtggcttcctggcgcgc
aggtatgcagaactgttgcgtctcacccgagcagctcttatctgtcagaagcagtacagg
atggtgagggtacggaaagcgtatctgaccatccgcaaggctacaatcaccatccaggcc
ttcacacggggcatgttcacacgccgcctgtaccaagagtacgtgctgcaccacaaggcc
agtgtcatccagagaacagtgcgcggatggctgcagaggaggaagttcctccgtgcccga
aacgcagcagtggtgctgcagtgcgcttacaggcgtgtactcgccaagcgacagctgaaa
cagctgaagatcgcggctcgcacagcagaacacttcaaggatctcaacgtcggcatggag
aataagattgtccagcttcgaagaaagatggacactcagaaacacgagtataaggtgcag
agtgagaagctgtccgaagccaacaccgcattggtcacggaggtcagcaaactgcagaag
gagctggagacggcacgcaatcgtaaaggcgagaccacgcagctgagctcactgcaggac
gagttggagaaactgagggcggagctccaggaggcacacgcccaaaggaaaaagctcgag
gaggagcacagcactgagaagctgggactggaacagagagtccaggagctggagagagaa
aactctctgctgaaggatgagaaagaagcgatgaaccagaagatccttcgccaatcgcag
agctccgggggtaaaggtggcagtttgtctcagaaagaggctagtctacaggctgagttg
gatgaagagagactgcgctatcagaatctgctgaaggagttttccagactggagcagaga
tgtgacaaccttcaggaagaagccacttatgccaaatttgttccaggccatcggagaagc
ccatccatccaaagcagcttgggctctgactccacattcccctccatctctatgtctgag
gtgggagacactgaggacaccattcagcaggtggaggacatgggactggagaaggcagcc
aacgacatcagtgtattcatgaagctgcagaaaagagtacgagagctggagcaagagagg
aagagactccagaccaacctggagaagatggaggagctcggcaagcacaaagcgattgaa
gcaaatagctcaacgtcagaggcagacacaaatgcagatctggcctacaacagtctcaag
aggcaggagctggagtctgagaacaagaagctgaagaacgacttgaatgaactcaggaag
gcgctggcggaccgggcctccgagaactgctcgtccaatgaaccgcaagacagctacaat
gttctgctcaatcagctcaaagcagccaatgaggaactggatatacgcaaagaggaggtt
cttatgctaaaaacacagatcgtcagcaccgccaagccatcagaaaacaccaatcacatt
aactccaatgaaatcatatgggacaacagcaaaaagcctgtggacaaggaggaggttttg
cagggctaccagggtctcagtgagtccaagaggcttctggaggcacagcttcaatcccag
aacaggaagcacaaggatgagctggaggctctgcacacgcaaatcgaggtgatgaaggtg
gatctggagaagaagcaggagatgctgaatcacttcagcacgctgccccccgatgccctg
gtggagttcagcgtccagcaggagatcacacgcctcaccaacgagaacctggacctcaag
gagatcatggaaaagctggagaaaaatgagagaaaactgaaaaagcagctcaagatctac
atcaagaaagttcaggagcttgaagcatctcaggcagcggcgaatcggcccaagctggtc
aggcaggtcacagttcagaggaaggagaaggactttgagggcatgctggagtactacaaa
gaggacgaggccctgctggtcaggatgcttatcagcgacatgaagccccaggacgtttct
gctacagtaccttgtctcccagcgtacatcctcttcatgtgcatccggcatgcagactac
atcaacgatgaccagaaagtgcactctctgctcacctccaccattaacgctatcaagaaa
cttctcaagaaaaacagcgaagactttgagatgacatctttctggctagctaacacgagt
cgacttctgcactgcctgaaacagtacagtggagaggaggcattcatgacccagaacaca
ccaaaacagaacgagcactgcctgaagaactttgacttggctgagtaccggcaggttctg
agtgacctgagcatccagatctaccagcagctcgttagaatagctgagggcatgctgcag
cccatgatcgtgtcggccatgctagagagcggcagtctgactggagtgaagcccatgggc
tacaggaaccgctcctccagtgtggactgtgacagtggaggcccatcaagctacacgctg
gaggttttgatcaagcagctcggtcagttctacacactcatgagtgaccatgggctcgac
cctgagatcatacagcaggttgtgcgccagctcttctacagcatcaacgctgtctcactt
aacaacctgctgctgcgcaaagacgtgtgttcctggagcaccggcatgcagctcaggtac
aacatcagtcaaatggaggagtggttgaggggacgaaatcttcaccagagggaagttatg
ttaaccatcgagcccctcatccaggctgctcagctgctacaggtgaagaagaagacatct
caggacgctgaggccatctgctccatgtgcaatattctgagcatgcaacagattgtgaag
atcctgaatctgtacacgccgctgaacgagtttgaggagagggtcactgtgtccttcatc
agagacatacagaatcttctacaaggccgtacagagaacaacctgctcctggtggacacc
aagcacacgttccctgtgctcttcccttacactccttcagctttgagcctggaaacgatg
cacatccctgcctctctcaacctggacttcctcgtcagagtctga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (57)   
   KEGG ORTHOLOGY (1)   
   RefGene (52)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (10)   
   Pfam (10)   
All databases (79)   

Download RDF
DBGET integrated database retrieval system