KEGG   Isoptericola variabilis: Isova_0427
Entry
Isova_0427        CDS       T01520                                 
Name
(GenBank) DNA polymerase III, delta prime subunit
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
iva  Isoptericola variabilis
Pathway
iva03030  DNA replication
iva03430  Mismatch repair
iva03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:iva00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Isova_0427
   03430 Mismatch repair
    Isova_0427
   03440 Homologous recombination
    Isova_0427
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:iva03032]
    Isova_0427
   03400 DNA repair and recombination proteins [BR:iva03400]
    Isova_0427
Enzymes [BR:iva01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Isova_0427
DNA replication proteins [BR:iva03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Isova_0427
DNA repair and recombination proteins [BR:iva03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Isova_0427
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA AAA_16 Mg_chelatase AAA_5 AAA_22 DNApol3-delta_C
Other DBs
NCBI-ProteinID: AEG43224
UniProt: F6FU28
Position
451824..452960
AA seq 378 aa
MSVWDDVVGQPDAVRTLSRAATDPAAMTHAWLLTGPPGSGRSVAARAFAAALQCDQGGCG
ACHACTTTLAGTHPDLTVVATEKVVIQIEEVRELIGTASRTPSSGRFRVIVVEDADRMAE
RTTNVLLKAIEEPPPHTVWVLCAPSAQDVLPTIRSRCRGVVLRVPPAEAVAELVVRRDGV
DPHVALTAARAAQSHVGLARRLARDPAARERRAAVLEIARRIRGVPDAVLAAGELVDVAK
AEATAATAERDAAEKAELLRALGVGEGETLPPRLRSQLKQLEDDQKRRATRHQRDVLDRA
MVDLLSLYRDVLVVQLGADVDLVNTEQAATVRALAADSTPEQTVRRMDAIGVARERLEGN
VAPLLALEAMTIALRPQG
NT seq 1137 nt   +upstreamnt  +downstreamnt
atgagcgtgtgggacgacgtcgtcggccagccggacgccgtccgcaccctgagccgcgcg
gcgaccgacccggccgcgatgacgcacgcctggctcctcacgggcccgcccggctcgggc
cggtccgtcgccgcgcgcgcgttcgccgccgcgctgcagtgcgaccagggcggctgcggc
gcctgccacgcgtgcacgacgacgctcgcggggacgcaccccgacctcaccgtcgtggcg
accgagaaggtcgtcatccagatcgaggaggtgcgcgagctcatcggcaccgcgtcgcgc
accccgtcgtcgggccgcttccgcgtcatcgtcgtcgaggacgccgaccgcatggccgag
cgcaccaccaacgtgctgctcaaggcgatcgaggagccgccgccgcacaccgtgtgggtg
ctgtgcgcgccgagcgcccaggacgtgctgccgacgatccgctcgcgctgccgcggcgtc
gtgctgcgggtgccgcccgccgaggcggtcgccgagctcgtcgtgcggcgcgacggcgtc
gacccgcacgtcgcgctcacggccgcgcgcgccgcgcagagccacgtcggtctcgcgcgc
cggctcgcgcgcgaccccgccgcccgcgagcggcgcgcggcggtgctggagatcgcgcgg
cgcatccgcggggtgcccgacgccgtgctcgccgctggcgagctcgtcgacgtggccaag
gccgaggcgacggccgcgacggccgagcgcgacgccgccgagaaggccgagctcctgcgg
gccctcggggtcggtgagggcgagacgctcccgccgcgcctgcgctcgcagctcaagcag
ctcgaggacgaccagaagcgccgcgccacgcgccaccagcgcgacgtcctcgaccgggcg
atggtcgacctgctctcgctgtaccgggacgtgctcgtcgtccagctcggcgccgacgtc
gacctcgtcaacaccgagcaggccgccacggtgcgggccctggccgcggactcgacgccc
gagcagacggtgcgtcgcatggacgcgatcggcgtcgcgcgcgagcgcctcgaggggaac
gtcgcgccgctgctggcgctcgaggcgatgacgatcgcgctgcgcccgcaggggtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (27)   

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