KEGG   Janthinobacterium agaricidamnosum: GJA_220
Entry
GJA_220           CDS       T03157                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase, B subunit
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
jag  Janthinobacterium agaricidamnosum
Brite
KEGG Orthology (KO) [BR:jag00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:jag03032]
    GJA_220 (gyrB)
   03400 DNA repair and recombination proteins [BR:jag03400]
    GJA_220 (gyrB)
Enzymes [BR:jag01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     GJA_220 (gyrB)
DNA replication proteins [BR:jag03032]
 Prokaryotic type
  DNA Topoisomerases
   GJA_220 (gyrB)
DNA repair and recombination proteins [BR:jag03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      GJA_220 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim HATPase_c GyrB_hook Toprim_4 HATPase_c_3
Other DBs
NCBI-ProteinID: CDG80883
UniProt: W0V0M4
Position
complement(285694..288192)
AA seq 832 aa
MSENPLDNPIPAKAEEYGAASIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSI
DESLAGHCTEIHVTIHSDNSISITDNGRGVPTGLKMDDKHEPKRSAAEIVMTELHAGGKF
DQNSYKVSGGLHGVGVSCVNGLSKLLKLTIRRDGKVHHMEFVRGVPQNRIIEMVDGVATS
PIQVIGETDKRGTDVHFWADEEIFTHVEFHYEILAKRIRELSFLNNGVNIKLSDQRTGKE
EVFAFEGGTRGFVEYINKAKSVLHPTIFQATGERQSDQGTNITVDVSMQWNDAYNEQVLC
FTNNIPQRDGGTHLTGLRAAMTRVINKYIDEHEFAKKAKVEINGDDMREGLTCVLSVKVP
EPKFSSQTKDKLVSSEVRGPVEEIVAKTLSDYLQEKPNDAKIICGKIVEAARAREAARKA
RDLTRRKGVMDGLGLSAKLADCQEKDPALSELYIVEGDSAGGSAKQGRDRKFQAILPLRG
KVLNVEKARFEKMLSSEQITTLIATLGTSIGPDEFNVDKLRYHRIIIMTDADVDGAHIRT
LLLTLFYRQMPQLVERGHIYIAQPPLYKVKAGRDERYLKDDLEEASYMMTVALNSAVLVP
REGAEAISGEALGELVRQFNLANAIMTRLTRVIDRAALTAIMTGVTLNLDTIEQAETSRQ
ALESTINDPAVKVFVRSDELSEKHVLRVERMHHGNVKVSAIDADFVQGPDYSVLANAAAT
FQGLIGAGAFVRRGEGERMKEIAVVDFHHAMQWLRDEAERTVSKQRYKGLGEMNPDQLWE
TTMDPTVRRLLKVQIEDAIAADQIFTTLMGDDVEPRRAFIENNALRAGNIDV
NT seq 2499 nt   +upstreamnt  +downstreamnt
atgtccgagaatccactagacaatccgatcccagccaaagcggaagaatacggcgccgca
tcgatccaaatcctggaaggcctggaagcggtgcgcaagcgccccggcatgtatatcggc
gacacctcggacggcaccggcttgcaccacctggtgttcgaagtgctggacaactcgatc
gacgaatcgctggccggccactgcaccgaaatccacgtcacgatccactccgacaactcg
atctcgatcaccgacaatggccgcggcgtgccgaccggcctgaaaatggacgacaagcac
gagcccaagcgcagcgccgctgaaatcgtcatgaccgaactgcacgccggcggcaagttc
gaccagaactcgtacaaagtgtcgggcggcttgcacggcgtcggcgtctcgtgcgtcaac
ggcttgtcgaaactgctgaaactgaccatccgccgcgacggcaaagtgcaccacatggaa
ttcgtccgtggcgtgccgcaaaaccgcatcatcgaaatggtcgacggcgtcgccacctcg
ccgatccaggtcatcggcgaaaccgacaagcgcggcaccgacgtccacttctgggccgac
gaagaaatcttcacgcacgtcgaattccactacgaaatcctggccaagcgcatccgcgaa
ctgtccttcctgaacaacggcgtcaacatcaagctgtccgaccagcgcaccggcaaggaa
gaagtgttcgcgttcgaaggcggcacccgcggtttcgtcgaatacatcaacaaggccaag
tcggtgctgcacccgacgattttccaggccaccggcgagcgccagtcggaccagggcacc
aacatcaccgtcgacgtgtcgatgcaatggaacgacgcctacaacgaacaggtgctgtgc
ttcaccaacaacatcccgcagcgcgacggcggcacccacctgaccgggctgcgcgcggcg
atgacgcgggtgatcaacaaatacatcgacgaacacgaattcgccaagaaggccaaggtt
gaaatcaacggcgacgacatgcgcgaaggcttgacctgcgtattgtccgtcaaggtgccg
gaaccgaaattctcgtcgcaaaccaaggacaagctggtgtcgtccgaagtgcgcggcccg
gtcgaggaaatcgtcgccaagacgctgtccgactacctgcaagaaaaaccgaacgacgcc
aagatcatttgcggcaagatcgtcgaagcggcgcgcgcgcgcgaagcggcccgcaaggcg
cgtgacctgacccgccgcaaaggcgtgatggacggcctcggcctgtccgccaaactggcc
gactgccaggaaaaagacccggccttgtccgaactgtacattgtcgagggcgattccgcg
ggcggctcggccaaacagggacgcgaccgcaaattccaggccatcctgccattgcgcggc
aaggtgctgaacgtcgaaaaggcgcgcttcgaaaaaatgctgtcgtcggaacagatcacc
accctgatcgcgacgctgggcacctcgatcggaccggacgaattcaacgtcgacaaactg
cgctaccaccgcatcatcatcatgaccgatgcggacgtcgacggcgcccacatccgcacc
ctgctgctgacgctgttctaccgccagatgccgcaactggtcgagcgcggccacatctac
atcgcccagccgccgctgtacaaggtcaaggccggccgcgacgagcgctacctgaaggac
gacctggaagaagccagctacatgatgaccgtggcgctgaacagcgccgtgctggtgccg
cgcgaaggcgccgaggccatcagcggcgaagcgctgggcgaactggtacgccagttcaac
ctggccaacgccatcatgacccgcctgacccgcgtgatcgaccgtgccgcgctgaccgcc
atcatgaccggcgtgacgctgaacctggacaccatcgagcaagccgaaacctcgcgccag
gcgctggaaagcaccatcaacgacccggcggtcaaagtcttcgtgcgttccgatgaactg
tccgaaaaacacgtgctgcgcgtcgagcgcatgcatcacggcaacgtcaaagtcagcgcc
atcgacgccgacttcgtgcaaggcccggactacagcgtgctggccaacgcggcggcgacg
ttccagggcttgatcggcgcaggcgcgttcgtgcgccgcggcgaaggcgagcgcatgaag
gaaatcgccgtggtggacttccaccacgccatgcaatggctgcgcgacgaagccgaacgc
accgtctcgaaacagcgctacaaagggttgggcgagatgaacccggaccaactgtgggaa
accaccatggacccaaccgtgcgccgcttgctgaaagtgcagatcgaggatgcgatcgcg
gcggatcagattttcacgacgctgatgggggacgatgtggaaccgcgcagggcgtttatt
gagaataatgcgttgagggcggggaatattgacgtttaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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