KEGG   Jatropha curcas (Barbados nut): 105643647
Entry
105643647         CDS       T03922                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 50 isoform X1
  KO
K13179  ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
Organism
jcu  Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:jcu03041]
    105643647
   03009 Ribosome biogenesis [BR:jcu03009]
    105643647
Enzymes [BR:jcu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     105643647
Spliceosome [BR:jcu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    105643647
Ribosome biogenesis [BR:jcu03009]
 Eukaryotic type
  90S particles
   Helicases
    105643647
  Pre-60S particles
    105643647
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Helicase_C_2
Other DBs
NCBI-GeneID: 105643647
NCBI-ProteinID: XP_012084225
Position
Unknown
AA seq 650 aa
MLTIAPPHPLSSFRLQITDSHSQSHRGVVFDYVSKSGAKPFALVRAACSSTRLNTPFQSV
TELADGGGVCSHSPNKEDEDATSGIANPGAVTKTANPTAGSKRLSGNFRKLKAQKVKFLM
MKQKVRKHADVSAAADADFDTLVTSYAKSDSTDKSCGDEMATRRGEKMKVSSSNKKLSEY
QTLDYEIMPDKPVKSIPRRAGTVHAGSSSYRRGWGNVGLESQSANPLQRKHKFSAQNDFF
SRKSFRDLGCSQFMMESLKQQSFLRPSNIQAMAFTPVIEGKCCVIADQSGSGKTLAYLIP
VIQRLRLEELQGLGESLSQNPRVLIMVPTAELASQVLNNCRSMSKFGVPFRSMAATGGFS
QRTQLQNLEQGVDILIVTPGRFLFLIKEGFLKLTNLKCSVLDEVDILFKDDDFEFALQSL
MNSSPLATQYLFVTATLPVDVYNKLIEIFPDCEMIMGPSMHRTSTRLEEVLVDCSGEIGT
ERTPETAFVNKKHALLQLMEQSPVSKTIVFCNKIETCRKVENVLKRFDRKGAYVRVLPFH
AALAQDSRVANMKEFMNYSSGGCSLFLVCTDRASRGIDFTGVDHVILFDFPRDPSEYVRR
VGRTARGAVGKGKAFIFVVGKQVSLAQKIIDRNRKGHPLHDVPSAYELMS
NT seq 1953 nt   +upstreamnt  +downstreamnt
atgctgaccatagctcctcctcatcctctttcaagcttcaggcttcaaatcaccgattcc
cacagccaaagccacaggggtgtcgtctttgattatgtatcgaaaagcggtgcaaaacct
tttgctttggttagagcagcatgtagttcgacccgcttgaacactccatttcagtctgtt
actgagctcgctgatggtggcggcgtttgctcccattctccgaacaaggaggacgaagat
gctacttcaggcattgcaaatccaggcgctgtcacaaaaactgcgaatccaacagcaggt
agtaagagattgtctggaaatttcagaaaactcaaagcacagaaggtcaaattcctcatg
atgaagcaaaaggtaaggaaacatgcagatgtatcagcagcggcagatgcagattttgat
acattggtcacctcatatgctaaatcagattctacagacaagtcttgcggggatgaaatg
gctaccaggagaggagagaaaatgaaggtttccagttccaataagaaacttagtgaatat
cagactttggattatgaaattatgccagataaacctgtaaaatctattcccagaagagct
ggaacagttcatgctggttcttcttcttaccgaagaggatggggtaatgttggtctcgag
tcccaatcagcaaatcctctacaaagaaagcacaagttttctgctcagaatgacttcttt
agtagaaaatcattcagagatttgggatgtagtcaatttatgatggaatctttaaagcaa
caatctttccttcgcccttcaaatattcaggccatggcatttacacctgtaattgagggg
aaatgctgtgttatagcagatcaaagtggatcaggaaagacattggcatatcttatacct
gtaattcagcgtctcaggttagaagaactccaaggacttggtgaatccttatcacagaat
cctcgagtacttataatggtgccaacggctgagctggcttctcaggttttgaataattgc
cgatcaatgtcaaaatttggggttccatttcggtctatggctgcaactgggggattctct
cagaggactcaattgcaaaatctagaacaaggtgttgacattctaatagtcacacctggt
cgtttcttgttcctaattaaggaaggattcttgaagttgacaaatctgaaatgttctgtg
ttggatgaggtagacatattgttcaaagatgatgactttgagtttgcactccaaagcttg
atgaattcttcacctcttgccacacaatatctgttcgtgactgctactttaccggtagat
gtgtataacaagcttattgaaatctttcctgattgtgaaatgatcatgggacccagtatg
catcgcacgagtaccagactggaagaggttcttgttgattgcagtggagaaattgggaca
gagcggactccagagacagcattcgttaataagaaacatgctcttctgcagcttatggag
caaagtcccgtctccaaaacaattgttttctgtaacaagattgagacatgcagaaaagta
gagaatgtgttaaaacgttttgatagaaaaggagcctatgttcgggttctaccattccat
gctgctctggcacaagattcaagggttgcaaacatgaaagagttcatgaattatagttct
ggaggatgctcattatttttggtttgcactgatagagcatcgcgaggaattgattttact
ggtgtggatcatgttatactctttgactttccacgtgatccaagtgaatacgtgcgtcgt
gttggaagaacagctagaggtgctgtgggaaagggcaaggcgtttatctttgtggttggt
aagcaagtttctctcgcacagaagataattgacagaaaccgaaaaggtcacccattgcat
gatgtgccatctgcatatgagcttatgagttaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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