KEGG   Jonesia denitrificans: Jden_0087
Entry
Jden_0087         CDS       T00972                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
jde  Jonesia denitrificans
Pathway
jde03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:jde00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Jden_0087
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:jde03400]
    Jden_0087
Enzymes [BR:jde01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     Jden_0087
DNA repair and recombination proteins [BR:jde03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Jden_0087
 Prokaryotic type
     Jden_0087
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: ACV07763
UniProt: C7R585
Position
96784..97476
AA seq 230 aa
MAKTLTELAEDHLIAADWAQALEPVAPTIAALGERLRSEVSAGRGYLPAGDHVLRAFQRP
LNDVRVLIVGQDPYPTPGHPIGLSFAVDKRVRPIPRSLANMYRELHDDLGFPPAEHGDLS
SWADQGVMLLNRVLTVQPGKPASHRGWGWEAVTEHAITTLVARNRPLVAVLWGRDAANLK
PLLGSTPTVVSPHPSPLSAHRGFFGSRPFSQVNALLQEMGAEPVNWQVAP
NT seq 693 nt   +upstreamnt  +downstreamnt
atggcaaagaccctcactgaactggccgaagatcacctcattgccgcagactgggcacaa
gcgttggaaccggtcgcccccacgatcgctgcactgggtgaacggttgcgtagtgaagtc
agcgccgggcgtgggtatctaccggccggggaccatgtgttacgggcgtttcaacgccca
ctcaacgatgtgcgggtcctcattgtggggcaagacccctaccccacgccggggcacccc
attgggttgtcgttcgccgttgacaaacgggtgcggcccattccacgcagtttggcgaac
atgtaccgagaattgcacgacgacctggggttcccgcccgcagagcacggcgatctatcc
tcctgggcggatcagggagtcatgctgctcaaccgcgtcttgaccgtgcaaccagggaaa
cccgcctcccaccgcgggtgggggtgggaggcagtcacagaacatgccatcacaacgttg
gtcgcccgcaaccgtcccctcgtcgccgtgctctggggtcgagatgctgcgaacctgaaa
cccctgcttggctccacccccaccgtcgtgtcaccgcacccttcaccgttgtccgctcac
cgtgggttcttcgggtcgcggccattttctcaggtgaatgcactgttacaggagatgggg
gcagaaccagtgaactggcaggtggcgccataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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