KEGG   Jeotgalibacillus malaysiensis: JMA_13750
Entry
JMA_13750         CDS       T03570                                 
Name
(GenBank) ATP-dependent helicase
  KO
K16898  ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
Organism
jeo  Jeotgalibacillus malaysiensis
Brite
KEGG Orthology (KO) [BR:jeo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:jeo03400]
    JMA_13750
Enzymes [BR:jeo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     JMA_13750
DNA repair and recombination proteins [BR:jeo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     JMA_13750
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PDDEXK_1 UvrD_C_2 DEAD AAA_12 MATCAP Med15_M
Other DBs
NCBI-ProteinID: AJD90692
UniProt: A0A0B5APT7
Position
1259250..1262921
AA seq 1223 aa
MIPEKPAHVTWTDEQWRAIFEKGSDILVAAAAGSGKTAVLVERLIQKVLDTDQPTDIDEL
LVVTFTNASAAEMKHRVGEALEKALADDPESRHLRKQLTLINKASISTLHSFCLEVIRKY
YYLIDIDPGFRIADDTEAELLKDEVVEEILEQEYGIEDNHLFVELVEAVTSDRSDDALHQ
MIRKLHTFSRSHADPDIWLDGIVTLHQTDNVQIDDHPLANYVLFHVQLEAEGAIELINLA
LDAARKPGGPYPRAVNFEDDLRQLNEIRHAAGWKEAEAAVSNFSMGRLKPCKGDDFDEEL
VEQAKKWRDQAKKMINDLKDGFFVRSPEQLLEDMNQMTGRLSTLVELVRKFEKAFKSAKE
ERGLVDFNDLEHFCLEILRDPDTLEPSQAAYHYRNQFKEVLVDEYQDTNMVQETILQLVK
SGGEKDGNLFMVGDVKQSIYRFRLAEPNLFLGKYRTFQQDGSGQKIDLAKNFRSRPEVLD
GVNFIFRQIMGEMVGEIDYDKDAELIPGAPYPTDLTVPVRFTVIDQADEDAPGEEMPEEV
MDERELERSTLEARYMIKEIRGMIDGGRQIYDVKKKLYRPLEYRDIVILTRSMTWTPDIM
DEFRQAGIPLYADLSTGYFDATEVAIMVSLLKIIDNPIQDIPLASVLRSPIVRCTEEQLA
KIRRADPKGTFWDALQAYMSSGDEDTELKEKCSWFLISLRNWRAYARTGAVSDLVWQLFR
DTQFYDFVGGLPGGKQRQANLRALYDRARQYESTSFRGLFRFLRFVERMRDRGDDLGAAR
ALSEQEDVVRLMTIHKSKGLEFPVVFISGMARQFNEMDLRGSYLLDKDFGLALSYVDIEN
RISSTTLPQMAFKEKKRLENLAEEMRVLYVAMTRAKEELILIATVPDAEKLKEKWSLSGS
YKSWLLPDFTRKGARSYADWVGPALARHPHAVHAVSAGLIEDPSVWDMQQHHKHLFAEEQ
RKEESAAEWLSHVRNHEPVPGESEHHEDILHRLKWHYPYEEAAMVRSKQSVSSIKRQHET
LDETGADTIVKPAKKLYGRPAFLQQEKMTAAEKGTIMHTVMQQVPLSKVPGREEIESLIA
SLVVREILTEEQAETVRVNHVAAFFQSTLGKRMIHAANVRREVPFTYAATPAEAGIQLNV
DDPVLIQGIADCLFEDENGLVLLDYKTDYVDHSDPDVHDMLAERYRLQLSLYQQALEKSL
NRKIDEVYLYFFNADLTIKLEEN
NT seq 3672 nt   +upstreamnt  +downstreamnt
atgattcctgaaaaaccagcgcacgtgacatggaccgatgaacagtggcgtgccattttt
gaaaaaggcagtgatattctagtcgctgccgccgccggatcggggaaaacagcggtcctt
gttgagcggctgattcaaaaagtacttgataccgaccagccgactgatattgacgaactg
ctggttgtaacatttaccaatgcatcagcagccgaaatgaagcaccgtgtcggggaggcg
cttgaaaaagcactcgctgatgatcctgaatccagacatttgagaaagcagctgacgctg
atcaataaagcatctatttcaactctccactcattctgtctcgaagtcatcagaaaatat
tactacctgattgatattgatcccggctttagaattgctgatgacacagaagctgagctt
ttaaaggatgaagtggtggaagaaattcttgagcaggaatacggaattgaagataatcat
ttatttgttgagcttgtagaagctgtaaccagtgacagaagtgatgatgcgcttcatcag
atgatcagaaaacttcatacattttcgcgctcacatgctgacccggacatctggcttgac
ggcattgtcacgcttcatcagacagataatgttcagatcgatgaccatccgcttgcaaat
tatgtactgttccatgtccagcttgaggctgagggggcgattgaattaattaatcttgcg
cttgatgctgcaagaaagccgggcggaccatatccgagagcggttaattttgaagatgat
ctcagacagctgaatgaaatccgccatgctgcagggtggaaggaagcagaagctgcagtc
tccaatttttcaatgggaaggctgaagccgtgtaaaggtgatgacttcgatgaggagctt
gtagagcaggcgaaaaagtggcgcgatcaggcgaagaaaatgatcaatgatttaaaagac
ggattttttgtcagaagccctgaacagctgcttgaggatatgaatcagatgaccggcaga
ctttcaacgcttgtagagcttgtacggaagtttgagaaagcattcaaatctgcaaaagaa
gaacgcgggctggtagactttaatgacctggaacatttctgccttgagatcctgcgtgac
cctgatactttggagccatcccaggcagcttatcattaccgtaatcagttcaaagaagtg
ctggttgatgaataccaggataccaatatggtacaggaaactattttacagcttgtgaaa
tcaggcggtgaaaaagatgggaatctttttatggtaggagatgtgaagcagtctatttac
cgcttcagactggctgagccgaatttgttccttgggaaataccggacgttccagcaggat
ggaagcgggcagaagattgaccttgctaaaaacttcagaagccgtccggaagtacttgat
ggtgttaactttattttccggcaaatcatgggtgaaatggtcggggagattgattatgac
aaggatgctgagctgatcccgggtgccccgtacccgacagatctcacagtccctgtcaga
ttcacagtcattgaccaggcagatgaagatgcccccggtgaggaaatgcctgaagaagta
atggatgaaagagagcttgaacgttcaacgcttgaagcgcgctatatgattaaagaaatc
cggggaatgattgatggcggcaggcagatctatgatgtgaaaaagaagctgtaccgtccg
cttgaatacagagatatcgtcattttaacaagatccatgacgtggacccctgacatcatg
gatgaattcagacaggcgggtattccgctctacgcagacctttctacaggttattttgat
gcaacagaggtcgccattatggtgtcgctgttaaagatcatcgataatccgattcaggat
attccgcttgcctctgtcctgagatctccaatcgtcagatgtacagaagagcagctggca
aagattcgcagggcggatccaaaaggtactttctgggacgcgctgcaggcttatatgtcg
tctggcgatgaggatacagagctgaaggaaaagtgttcatggttcctgatctctcttaga
aactggcgggcttatgcgagaacaggtgccgtttcagaccttgtctggcagctgttcaga
gatacgcagttctatgattttgtcggagggctgccgggtggtaagcagcgacaggcaaat
ttaagagcgctttatgaccgggctaggcagtacgaatccacttcttttcgcgggcttttc
aggttcttgcggtttgttgagcggatgagagacagaggtgatgacctcggtgcagcaaga
gcgcttagcgaacaggaagacgttgtgcgcctgatgacgattcataaaagtaaaggcctt
gaatttccggttgtttttatttcagggatggcaaggcagtttaacgaaatggacttaaga
ggcagctatctgcttgataaggatttcggtcttgcgctgtcttacgttgatattgaaaat
agaatcagcagtacaacgcttccgcagatggcttttaaagagaagaagcggcttgagaac
cttgctgaagagatgcgggtattatacgttgcaatgacgcgagcaaaagaagagctaata
ctgattgcaacagtgccggatgcagaaaaactgaaagaaaagtggtctctttcaggttcg
tacaaatcatggctgcttcctgactttacaagaaaaggtgcgagatcatacgcggactgg
gtcggtcctgcacttgcgcgtcatccccacgctgttcatgctgtgtcagcaggtctgatt
gaagacccatcagtgtgggatatgcagcagcatcataaacacctttttgctgaagaacag
cgtaaggaggaatcagctgctgagtggcttagtcatgtcagaaaccatgagccggttcct
ggtgagagtgagcaccatgaggatatcttgcatcgtctgaaatggcattatccttatgaa
gaagctgcaatggtcagatcaaagcagtcagtttcttctataaaacgccagcatgaaacg
cttgatgagaccggggcagatacaattgtaaagcctgctaaaaaactgtacggccgtccg
gcatttcttcagcaggagaagatgacagcagctgaaaagggtaccatcatgcatacggtt
atgcagcaggtgccgctcagtaaagtgcccgggcgtgaagaaatcgaatcactcattgca
agcctggtcgtccgtgagattttgacggaagaacaggctgaaacagtgagggtgaatcat
gtagctgcattctttcaatcaacccttgggaaacgcatgattcacgctgcaaacgtgagg
cgtgaagtaccgtttacgtatgcggcaaccccagctgaagcaggaattcagctaaatgtg
gatgacccggtattaatccagggtattgctgactgtctgtttgaagatgaaaacggactc
gtcctgcttgattacaaaacagattacgttgaccactctgatccagatgtgcacgatatg
cttgctgaacgctacagacttcagctgtcactataccagcaggcacttgaaaaaagctta
aatagaaaaattgatgaagtgtatttatactttttcaatgctgatttaacaatcaaacta
gaagagaactga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (38)   

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