KEGG   Juglans regia (English walnut): 108982284
Entry
108982284         CDS       T05245                                 
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X1
  KO
K18995  ATP-dependent RNA helicase DHX29 [EC:5.6.2.6]
Organism
jre  Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:jre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:jre03012]
    108982284
Enzymes [BR:jre01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     108982284
Translation factors [BR:jre03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    108982284
SSDB
Motif
Pfam: OB_NTP_bind HA2_C DEAD Helicase_C HA2_N nSTAND3 DND1_DSRM ATPase T2SSE AAA_22 AAA_19 FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 108982284
NCBI-ProteinID: XP_018809154
UniProt: A0A2I4DPT0
Position
16:28250121..28281332
AA seq 1454 aa
MAPKKKHNSSNRAHSKSSSRATPQASSSSSSSSSSGPRLQISAENENRLRRLLLNNNSAR
SAAPVDDTLSKAQKAKKLKTVYEKLSCEGFTNDQVELALSALKEGATFEAALDWLCLNLP
GNELPLKFASGNSLHTSGGSVGVILNSREGWTPSVDPSTEFKEEPPEISIKIKGRWDDDT
LDSRQPSQANWIRQYVEQQQEDDSTNWEDDVVDNGSLEEVHGPRSYDVIAKEYHAARLEA
TKAKEKGDKKSQERAGNVIRKLKQELSALGLSDNILASEFEYERASKDTSTSSMPHEHSE
GKSLCNVEAGSAFVVEADMDCCSSKDFPMKSSSSSYTEEKHGAKEESEDVELGGFFLEDA
PSNDGLSPEVLKLQKREKIRKLYDEKSLEKLDGIWKKGDPKKIPKAVLHQLCQRSGWEAP
KFNKVPGKESSLSYAVSVLRRSSGRGKSRKAGGLITLQLPDQDGTFESAEDAQNRVAAFA
LCHLFPDLPVHLLVMEPYASLVMQWKEGESLANMEDSEEDRRAGFVDSLLKADQSSSTAS
DDVVDCSLPENFQKLHVEDYKNSTVAASDSLIDRVDKRKEMESAYLRREQEIKMKMKRYK
EMLKTRAALPIAALKGEILQLLKENNVLVVCGETGSGKTTQVPQFILDDMVESGFGGQCN
IICTQPRRIAAISVAERVADERCEPSPGSDGSLVGYQVRLDSARNEKTKLLFCTTGILLR
KFSGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKNLIEKQSSYGKPKLKVLLMSATVDSN
LFSRYFGNCPIITAEGRTHPVTTYFLEDIYESINYHLPSDSPASIRNESTKEKFQSGPVN
IRRGKKNLVSSAWGDDSLLSEDCINPYYLPNMYESYGEQTRQNMKTLNEDVIDYDLLEDL
VCHVDETCGEGAILVFLPGVSEIYLLLDKLAASYRFGGPSSDWILPLHSSVASNDQKRVF
LRPPENIRKVIIATNIAETSITIDDVVFVIDCGKHKENRYNPQKKLSSMVEDWISQANAR
QRRGRAGRVKPGTCFSLYTRHRFEKLMRNFQVPEMLRMPLVELCLQIKLLSLGYIKPFLS
KALEPPREDAITSALSLLYEVGALEGDEELTPLGHHLAKLPVDVLIGKMMLYGAIFGCLS
PILSISAFLSYKSPFVYPKDERQNVERAKLVLLNDKIGGSSDSDDADRQSDHLLMMAAYR
KWEKSLREKGAKAAQNFCNSNFLSSSVMYMIRDMRIQFGSLLADIGLINLPKKYQVQGQK
KEDFDSWFSDASQPFNKYSCHSSVVKAILCAGLYPNVAATEQGITATALGNLKQSVGPVT
QGRPVWYDGRREVHIHPSSINSNLKAFRYPFLVFLEKVETKRIFIRDSSVISPYSILLFG
GSINIQHQTGLVVIDGWLKLTAAAQIAVLFKELRLTLHSLLKELIRKPVNATVVDNEVIG
SMIQLLLEEDKPLK
NT seq 4365 nt   +upstreamnt  +downstreamnt
atggctcccaagaagaaacacaacagtagcaacagggctcattcaaaatcttcgtccaga
gccacaccacaagcttcgtcttcgtcttcgtcttcgtcctcgtccggtcccaggctccaa
atttcggccgagaacgagaaccggctccgccgccttttgctcaacaacaactctgcccgg
tccgcggctccggtcgatgatactctctccaaggcccagaaggccaagaagcttaagacc
gtttacgagaagctctcctgcgaaggatttaccaatgatcaagtcgaactcgctctctcc
gctctcaaggagggtgctacatttgaggctgcccttgattggttatgcttgaatttgccg
ggtaatgagcttccattgaagttcgctagcgggaactctctacatacaagtggaggttct
gttggtgtcatattgaattcacgggaaggttggacgccttcggtggacccatctactgag
tttaaggaggaacctccagaaatttctattaagatcaagggccggtgggatgatgatact
ctagattcacgtcaaccttctcaagctaattggatcaggcaatatgtggagcaacagcaa
gaggatgattctacaaattgggaagatgatgtggttgataacggttcccttgaggaggtc
catggacctaggtcgtacgatgttatcgcgaaagagtaccatgctgcacggttggaagca
acgaaagcaaaggaaaaaggggataagaaaagccaggagcgtgcaggcaatgttatccgc
aaactcaaacaagaattgtctgctctaggattatcagataacatcttggcatcagaattt
gaatatgaacgagcttctaaggacacaagtactagttccatgcctcatgagcattccgaa
ggaaaatcattatgcaatgttgaagctgggtcagcctttgttgtggaagcagatatggat
tgctgtagctctaaggattttccaatgaaatcttcttctagttcatatactgaggaaaaa
catggtgcaaaagaagagtcagaagatgtagagcttggtggtttctttttagaagatgcc
ccatctaatgatggtttatctcctgaagttttgaaacttcagaagcgagaaaagatcaga
aaattgtatgatgagaagagtttggaaaaattggatggcatatggaagaagggggacccg
aaaaagatccccaaggctgttcttcaccaattatgtcaaagatcagggtgggaagcacca
aaattcaataaagtgccgggcaaagaaagtagtctctcttatgctgtcagtgtgttgcgt
agatctagtgggagaggtaagagcagaaaagctgggggcctgatcacacttcagcttcca
gatcaggatggaacctttgaatccgctgaggatgcacagaatagagtggcagcatttgct
ctttgtcatctgtttcctgatctcccagttcacctgctagttatggagccctatgcctca
cttgtcatgcaatggaaggaaggggagtcattggccaatatggaagacagtgaggaagat
cgaagggctggttttgtggattcgttattgaaagctgatcaatctagttcaactgcttct
gatgatgtggtggattgttctctaccagaaaattttcagaagctccatgttgaagactat
aagaactcaactgttgctgcttctgattcattaattgacagagtagacaaaaggaaagag
atggagagtgcatatttgagacgagaacaagagatcaaaatgaaaatgaagagatacaag
gagatgttgaaaactagggctgcccttcctattgctgctttgaagggtgaaatattgcaa
cttttaaaggagaataatgtccttgttgtttgtggggaaactggctctgggaagacaact
caggttccacaatttattttggatgatatggttgaatccggatttggtggacagtgcaac
atcatatgcacgcaaccaaggagaatagcggctatttctgtggcggaaagggttgctgat
gagcgctgtgaaccttcaccaggttcagatggttctttggttggttaccaagtccgtctt
gatagtgcaaggaatgaaaaaacaaagcttctcttttgtactacaggcattcttctaaga
aaattctcgggggacaaaaacttgactggtgttactcatgtcatagttgatgaagtgcat
gaacgatctttgttgggtgattttctactaattgttttgaagaatctgatagagaagcaa
tcttcttatggcaaaccaaaattgaaggtccttcttatgtctgctactgtagattccaat
ttgttttcaagatactttgggaattgcccaataattactgcagaaggcagaactcatccc
gtgacaacttactttcttgaggatatatatgaaagtattaattatcaccttccttccgat
tctccagcttctattaggaatgaatccaccaaggagaagttccagagtggtcctgtaaat
atccgtaggggtaagaagaatcttgtctcgtctgcatggggagatgattctctgctttca
gaagactgtattaacccgtattatttgccaaacatgtatgagtcatacggcgaacaaaca
cgacagaatatgaaaactttgaatgaagatgtcattgattacgatcttcttgaggactta
gtttgtcatgttgatgaaacttgcggcgagggtgccatacttgtgtttttacctggggtg
tctgaaatctacctgttactcgataagctagctgcttcttaccggtttggtggaccctct
tctgattggattctccctttacattcatccgttgcatcaaatgatcaaaaaagagtgttt
ttacgtcctcctgaaaatatacgcaaggtcattatagccacgaacattgcagaaaccagt
attacaatagatgatgtggtgtttgtcatcgactgtggaaagcacaaggagaatcgttat
aatcctcagaagaaattgtctagcatggttgaagattggatctcccaagcaaatgcaagg
caaaggcggggaagagctggacgtgtaaaacctggaacttgctttagcttgtatacacgc
cacagatttgagaaactcatgcgcaattttcaggttcctgagatgcttcggatgccatta
gtggagttgtgtttacaaattaagttactttctctgggttacataaagccttttttatcc
aaggctttagaacctcctagggaggacgctataacctcagcactttcattgttatacgag
gttggggcacttgaaggtgatgaagagttgacacctcttgggcatcatttggcaaaactt
cctgttgatgttctgataggaaagatgatgctgtatggtgctatatttggttgcttatca
cccattctctcaatttcagcatttttgagctacaaatctccatttgtgtatccaaaagat
gagaggcaaaatgttgaaagagcaaaattggtgcttttgaatgataagattggtggttct
agtgattcagatgatgctgacaggcaatctgaccacctgttgatgatggctgcatacaga
aaatgggagaagagtctacgcgagaaaggagctaaagctgctcaaaatttttgcaattca
aattttttaagcagctcagttatgtacatgataagagacatgagaatacagtttggatcg
ttgctagctgacattggcctcatcaaccttccaaaaaagtatcaggttcaaggacaaaag
aaagaggattttgacagttggttttctgatgcatcacaaccattcaataagtattcatgt
cattcatcagttgtaaaggctatattatgtgcaggtttataccctaatgtggcagccact
gaacaaggcattactgccacagctcttggcaaccttaaacagtctgttggcccagtaacg
cagggtcgccctgtttggtatgatggaagaagagaagttcacatacacccttcttctatc
aacagtaatttgaaagcatttcgatatcccttccttgtcttccttgaaaaggttgaaacc
aaaagaatttttattcgagattcttctgttatctctccttactctatcttgctgtttggt
ggctccatcaatattcagcatcagactggactggtggtcatagatggatggttaaaactg
acagcagcagctcaaattgcagtcctgttcaaggaactgcggttaactcttcattcactt
ttgaaggagctaattagaaagccagtgaatgccacagttgttgataacgaggttatcggg
tccatgatccaattgttgttagaagaagacaaacccctcaagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (12)   
   Pfam (12)   
All databases (54)   

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