KEGG   Juglans regia (English walnut): 108982712
Entry
108982712         CDS       T05245                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
  KO
K11594  ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
Organism
jre  Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:jre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:jre03019]
    108982712
   03041 Spliceosome [BR:jre03041]
    108982712
   03036 Chromosome and associated proteins [BR:jre03036]
    108982712
Enzymes [BR:jre01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     108982712
Messenger RNA biogenesis [BR:jre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     108982712
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     108982712
Spliceosome [BR:jre03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    108982712
Chromosome and associated proteins [BR:jre03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    108982712
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-GeneID: 108982712
NCBI-ProteinID: XP_018809707
UniProt: A0A2I4DRD6
Position
4:complement(32595500..32600100)
AA seq 618 aa
MRTSWADSVDNSASENAATAASDSSGLTRPTRSTYVLPHLRNRQPPSTDPPDRLHSVPSS
ANGRVGFGGPTTGLCWPGGSRPDLGRAAHNGSGGGRGRSGWSTRNGGWDRGREHEANPFV
DDDNAEQAISEQENTGINFEAYDDIPVETSGDTVPPPVNTFAEIDLGDALNQNIRRCKYV
KPTPVQRYSIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTAYPLA
LILSPTRELSRQIHDEAKKFSYQTGVKVVVTYGGAPINQQWRELERGVDILVATPGRLVD
LLERARISLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPQGVRQTMLFSATFPKEI
QRLASDFLSNYIFLAVGRVGSSTDLIVQRVEFVHEYDKRSHLMDLIHAQKESGMRGKQSL
TLVFVETKKGADSLEHWLYVNGFPATTIHGDRTQQEREKALRSFKSGKTPILVATDVAAR
GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNEGNSSLARPLADLMQEA
NQEVPAWLIRYASRTRTSHGGGGGSGRNRRSWGGRFGGRDFRRENSFNRAMDYHGGAKGS
GGYGFSGGYGPGVTSAWD
NT seq 1857 nt   +upstreamnt  +downstreamnt
atgagaacttcgtgggcagattctgtagataactctgcatctgagaatgcagccactgct
gcttctgatagtagtggcttaacacgccctacccgatcaacgtatgttctaccgcatctc
cgtaataggcaacctccttcaacagatccccctgatcgtttacactctgttccttcatca
gccaatggccgggttggctttggtggacccacaactggattgtgctggcctggaggttct
aggcctgacttggggcgtgcggcacataatggttctggtggtggtcgagggcgtagtggt
tggagtactaggaatggagggtgggaccgagggagggagcacgaggcgaacccctttgtt
gatgatgacaatgcagagcaagcgattagcgaacaagaaaatacgggtattaactttgag
gcttatgatgacattccggtggagacaagtggggacactgtgccaccccctgtgaatact
tttgcagagattgacttgggggatgcattaaatcaaaatattcggaggtgcaagtatgtg
aaaccaacacccgttcagcgttattctataccaatttctcttgcaggacgggacttaatg
gcttgtgctcagactgggtcagggaagactgctgccttttgctttccaattatcagtgga
atcatgcgggagcagtatgttcagagaccacgtggagcacggaccgcataccctcttgct
ctaattctttcgcctactagggagttatcacgccagatacatgatgaggcgaaaaagttt
tcctatcaaactggtgtcaaggtggttgttacttatggaggagcaccaatcaaccaacag
tggcgggagcttgagagaggagtcgatatccttgtggcaaccccgggacgattggttgat
ttgcttgagagagcaagaatctcattgcagatgatcagatatttagctcttgatgaagca
gatcggatgctggatatgggttttgagcctcaaatccgaaagatagtggaacaaatggac
atgcctccacaaggtgtgagacagacaatgctgtttagcgccaccttcccaaaagagata
cagagattggcatctgatttcctttcaaattacatatttttggctgttggaagggttggt
tcaagtactgatttgattgttcaaagagttgaatttgttcatgagtatgacaagagaagc
catctcatggatcttattcatgctcagaaagaaagtggaatgcggggaaagcaatcttta
actttagtttttgtggagacaaagaagggagccgactcattggagcattggttgtatgtt
aatggttttcctgcaactaccattcatggtgacagaacacaacaggaaagagaaaaggca
ttgagatcgttcaagagtggaaagacaccaattttagtggcaacagatgtagcggcacgt
ggtctggatattccccatgtagcgcatgtggtcaactttgatctccccaatgatattgat
gattacgttcaccggatagggcggacagggcgggctggcaaaacaggattagcaacggcc
ttctttaatgaaggtaattcatcactggcaaggccactggctgatctaatgcaagaagca
aatcaagaagtgcctgcttggcttatacgatatgcgtcaaggactagaacttctcatggt
ggtggtggcggcagcggcagaaatcggcggtcttggggaggccgatttggcggccgtgat
tttaggagggagaattcatttaatcgagctatggactaccatggtggagcaaaaggtagt
ggtggatatgggttttctggtggttatggtccaggtgtgaccagtgcttgggattag

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Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (32)   

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