KEGG   Juglans regia (English walnut): 109001451
Entry
109001451         CDS       T05245                                 
Name
(RefSeq) nuclear cap-binding protein subunit 2-like
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
jre  Juglans regia (English walnut)
Pathway
jre03013  Nucleocytoplasmic transport
jre03015  mRNA surveillance pathway
jre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109001451
  09122 Translation
   03013 Nucleocytoplasmic transport
    109001451
   03015 mRNA surveillance pathway
    109001451
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:jre03019]
    109001451
   03041 Spliceosome [BR:jre03041]
    109001451
Messenger RNA biogenesis [BR:jre03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     109001451
Spliceosome [BR:jre03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    109001451
SSDB
Motif
Pfam: RRM_1 DUF5721
Other DBs
NCBI-GeneID: 109001451
NCBI-ProteinID: XP_018834277
UniProt: A0A2I4FRJ8
Position
1:23038283..23060510
AA seq 251 aa
MASLFKDPSKLSAYRDRRFLGSQEDFEHALQTSITVYVGNMSFYTTEEQVYELFSRAGEI
KKIIMGLDKNTKTPCGFCFVLYYSRDDAEDAVKYISGTILDDRPIRVDFDWGFQEGRQWG
RGRSGGQVRDEYRTDYDPARGGYGKLVQRELEAQRQLVDYGGGSLGSFPPVMPPQYGRHG
RSHGHGGSYRRDYQRKRHRDDDGHGHETSKRTSDHESRRISDHDSRPEKNPRFRESGDSD
DDEEDDRKQRS
NT seq 756 nt   +upstreamnt  +downstreamnt
atggcttcccttttcaaggatccatcaaagctttcagcatatagggatagaagattcctt
ggatcgcaagaggactttgaacacgcacttcagacatcaattaccgtctatgtgggtaat
atgtctttttatacaactgaagaacaagtttatgagcttttctcccgagctggagagatt
aagaagataattatgggcttggataagaacacgaaaacgccttgcggcttttgttttgtt
ctttactactctcgagacgatgccgaggatgctgtcaaatatataagtggaacgattctt
gatgatcgtcctatccgtgtggattttgattggggattccaggaaggtaggcaatggggc
cgtggtcgaagtggtggacaggtgcgagatgaatatcgtactgattatgatcctgctaga
ggaggttatggaaagttagttcagagggagctggaagcgcaaaggcagcttgtagattat
ggtggcggttcattgggctctttcccgccagttatgccacctcagtatggtcgacatggt
agaagccatggtcatgggggctcttatcgtagagattaccaacggaagcgacaccgagat
gatgatggccatgggcatgagacctcaaagagaacctcagatcatgaatccaggagaatc
tctgatcacgactccagaccggagaagaatccgcgatttcgggagagtggcgattctgat
gatgatgaggaagatgacaggaagcaacgatcttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (37)   

Download RDF
DBGET integrated database retrieval system