KEGG T05009: B7C62

Kitasatospora albolonga: B7C62_14045

Entry

B7C62_14045       CDS       T05009

Name

(GenBank) RNA-splicing ligase RtcB

K14415

tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]

Organism

kab Kitasatospora albolonga

Brite

KEGG Orthology (KO) [BR:kab00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:kab03016]
    B7C62_14045
Enzymes [BR:kab01000]
6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     B7C62_14045
Transfer RNA biogenesis [BR:kab03016]
Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    B7C62_14045
Prokaryotic type
   tRNA splicing ligases
    B7C62_14045

SSDB

Motif

Pfam:

RtcB

Other DBs

NCBI-ProteinID:

ARF73264

Position

complement(3251090..3252283)

AA seq 397 aa
MSYVEVPGAKVPIRMWTDPESVEDVAMQQLRNVSTLPWIKGLAVMPDVHFGKGATVGSVI
AMEGAVCPAAVGVDIGCGMSAVKTSLTANDLPGDLSRLRSKIEQAIPVGRGMHDDIVDPG
RLHGFPTAGWDDFWGRFDGIAEAVKFRQERATKQMGTLGSGNHFIEFCLDETGFVWLMLH
SGSRNIGKELADFHIGQAQKLPHNQGLIDRDLAVFIADTPQMAAYRNDLFWAQEYAQFNR
AIMMGLFQDVVRKEFKKARVTFEPVISCHHNYVAEERYEGMDLLVTRKGAIRAGSGDYGI
IPGSMGTGSYIVKGLGNEKSFNSASHGAGRRMSRNAAKRRFSTKDLEEQTRGVECRKDSG
VVDEIPGAYKPIEQVIDQQRDLVEVVAKLKQVVCVKG

NT seq 1194 nt +upstreamnt +downstreamnt
atgtcgtacgtagaggtgccgggggcgaaggtccccatccggatgtggaccgacccggag
tcggtcgaggacgtggcgatgcagcagctgcggaacgtgtccacgctgccctggatcaag
ggtctcgccgtcatgccggacgtccacttcggcaagggggccacggtcggttcggtgatc
gcgatggagggtgcggtctgcccggccgcggtcggggtcgacatcggctgcgggatgtcc
gcggtgaagacgtccctgacggcgaacgatcttcccggcgacctgtcacggctccgctcc
aagatcgagcaggccattccggtgggccgggggatgcacgacgacatcgtggacccgggg
cggctgcacgggttcccgacggcggggtgggacgacttctgggggcggttcgacgggatc
gcggaagcggtcaagttccgtcaggaacgtgccacgaagcagatgggaacgctcggatcg
gggaatcattttatcgagttctgtcttgatgagaccggttttgtctggttgatgctccat
tccggttcgcggaacatcggcaaggaactggccgacttccacatcggccaggcgcagaag
ctgccgcacaaccagggcctgatcgaccgggacctggcggtgttcatcgcggacaccccg
cagatggcggcgtaccgcaacgacctcttctgggcgcaggagtacgcgcagttcaaccgc
gcgatcatgatggggctcttccaggacgtggtccgcaaggagttcaagaaggcgcgggtc
accttcgagccggtcatctcctgccaccacaactacgtggcggaggagcggtacgagggc
atggacctgctggtcacccgtaagggcgcgatccgggccggctccggggactacgggatc
atcccgggctccatgggcaccggctcgtacatcgtgaaggggctcggcaacgagaagtcg
ttcaactcggcgtcgcacggagcggggcggcggatgagccggaacgccgcgaagaggcgc
ttttcgaccaaggatctggaggagcagacgcggggtgtggagtgccgcaaggactccggg
gtggtggacgagattcccggcgcgtacaagccgatcgagcaggtcatcgaccagcagcgg
gacctggtcgaggtcgtcgcgaagctcaagcaggtggtgtgcgtgaagggctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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