KEGG   Kutzneria albida: KALB_1615
Entry
KALB_1615         CDS       T03039                                 
Name
(GenBank) ATP-dependent DNA helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
kal  Kutzneria albida
Pathway
kal03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KALB_1615
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kal03019]
    KALB_1615
   03400 DNA repair and recombination proteins [BR:kal03400]
    KALB_1615
Enzymes [BR:kal01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     KALB_1615
Messenger RNA biogenesis [BR:kal03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     KALB_1615
DNA repair and recombination proteins [BR:kal03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      KALB_1615
SSDB
Motif
Pfam: DEAD Helicase_C ResIII RecQ_Zn_bind Pribosyltran DacZ_P
Other DBs
NCBI-ProteinID: AHH94987
UniProt: W5W296
Position
complement(1777570..1779681)
AA seq 703 aa
MGYAWGVDELALRDLAEERLRALAGPEARLREDQWTAISALVSQRRRALVVQRTGWGKSA
VYFVATALLRALGEGPTVIVSPLLALMRNQVAAAARAGVHAATINSANTTEWDQVQQSVA
DGEVDVLLVSPERLNNPDFRDAVLPSLTASAGLLVVDEAHCISDWGHDFRPDYRRLRTLL
AGLPDGVPVLATTATANDRVVHDVTDQLGIGAGNESTLVLRGPLDRESLHLAVARLPSTE
ARLGWLAERLPELPGSGIIYTLTVSSAEDVAAFLRERGFAVASYSGKTDPAEREQAESDL
LANRVKALVATSALGMGFDKPDLGFVVHLGAPQSPIAYYQQIGRAGRGVRRAEVVLLPGR
EDREIWNYFASLAFPPEPVVRQVLDALANAGRTLSTAALEPMVELSRSRLEVVLKVLDVD
GAVRRVRGGWESTGQPWQYDAQRYGRIAQARSAEQQAMLDYLDTTGCRMEFLLRQLDDPA
AAPCGRCDNCTGRGWSTEVSESAASSARDRLRRPGVELPARRQWPSGMSALGVPLSGKIG
PAQVAAEGRVLGRLTDIGWGTRLRELLADSAPDQPVPDEVFAACVQVLAAWRWAERPTGV
VAIGSRRRPQLVSSLARRLAEIGRLTYLGAVVSGGEGSLRSNSAQRLAGLWQGLSLPAGL
TPDGPVLLVDDLVDSGWTMTLATKLVREAGAPAVLPFALAATN
NT seq 2112 nt   +upstreamnt  +downstreamnt
gtggggtatgcatggggtgtggacgaactcgcactgcgcgacctcgccgaggaacggctc
cgggcactggccggtccggaggcgagactgcgcgaggaccagtggaccgccatcagcgcg
ctggtctcgcagcgccgccgcgcgctggtggtgcagcgcaccgggtggggcaagtccgcg
gtctacttcgtggccaccgcgctgctgcgcgcgctgggcgaggggcccacggtgatcgtc
tccccgttgctggcgctgatgcgcaaccaggtcgcggccgcggcgcgggccggggtgcac
gcggcgaccatcaactccgccaacaccaccgagtgggaccaggtccagcagtcggtcgcc
gatggcgaggtggacgtgctgctggtgagcccggaacggttgaacaacccggacttccgg
gacgcggtgctgccctcgctgacggcgagcgcgggcctgctcgtggtggacgaggcgcac
tgcatctccgactggggccacgacttccgccccgactaccggcggctgcgcaccctgctg
gccgggctgccggacggggtgccggtgctggccaccacggccaccgccaacgaccgggtg
gtgcacgacgtcaccgaccagttgggcatcggcgcgggcaacgagtccaccctggtgctg
cgcgggccactggaccgggagagcctgcacctggccgtggcccggctgcccagcaccgag
gcacggctgggctggctcgccgagcggctgccggagctgcccggttccgggatcatctac
acgctgaccgtgtcctccgccgaggacgtggccgcgttcctgcgcgagcgcgggttcgcc
gtggcctcctactcgggcaagaccgatccggccgagcgcgagcaggccgagtcggacctg
ctggccaaccgggtcaaggcgctggtggccacctcggcgctgggcatgggtttcgacaag
ccggacctgggttttgtcgtgcacctgggcgccccgcagtcgccgatcgcctactaccag
cagatcggccgcgccggtcgcggggtgcgccgggccgaggtggtactgctgcccggccgc
gaggaccgcgagatctggaactacttcgcctcactggcgttccccccggaacccgttgtg
cgccaagtgctcgacgcgctggccaacgcgggccgcacgctgtccaccgcggcgctggag
ccgatggtggagctgtccaggagccgcctcgaggtggtgctcaaggtgctcgacgtggac
ggggcggtgcgtcgcgtgcgcgggggctgggagtccaccgggcagccgtggcagtacgac
gcgcagcgctacgggcgcatcgcgcaggcgcggtccgccgagcagcaggcgatgctcgac
tacctggacacgacgggctgtcgcatggagttcctgttgcggcagttggacgatcccgcc
gcggccccctgtgggcgctgcgacaactgcaccggccgcggttggtccaccgaggtgtcc
gagtcggccgcctcctcggcccgcgaccggctgcggcggcccggggtggagctgcccgcc
cggcggcagtggcccagcggcatgtccgcgctgggcgtaccgctcagcggcaagatcggc
cccgcccaggtcgccgccgagggccgcgtgctgggtcggctcaccgacatcggctggggc
acccggctgcgtgaactgctcgccgactccgcgcccgaccagccggtgccggacgaggtg
ttcgccgcctgcgtgcaggtgctggccgcctggcgctgggcggagcggccgaccggggtg
gtcgccatcggctcacggcgccgcccgcaactggtgtccagcctggcccggcggctcgcc
gagatcggtcggctgacctacctcggtgccgtggtctccggcggcgagggcagtctgcgc
tccaacagcgcccagcggctcgccgggctctggcaggggctgagcctgcccgccgggctg
acgcccgacgggcccgtgctgctcgtcgacgacctggtggacagcgggtggaccatgacc
ctggccacgaagctggtgcgtgaggcaggagcccccgccgtcctgcccttcgccctggcg
gcgaccaactga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (29)   

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