KEGG   Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonas culicis): CKBE_00696
Entry
CKBE_00696        CDS       T02427                                 
Name
(GenBank) DNA polymerase III subunit alpha 1
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
kbl  Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonas culicis)
Pathway
kbl03030  DNA replication
kbl03430  Mismatch repair
kbl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:kbl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CKBE_00696
   03430 Mismatch repair
    CKBE_00696
   03440 Homologous recombination
    CKBE_00696
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:kbl03032]
    CKBE_00696
   03400 DNA repair and recombination proteins [BR:kbl03400]
    CKBE_00696
Enzymes [BR:kbl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CKBE_00696
DNA replication proteins [BR:kbl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CKBE_00696
DNA repair and recombination proteins [BR:kbl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CKBE_00696
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DNA_pol_IIIA_C
Other DBs
NCBI-ProteinID: AFZ83886
Position
complement(788092..791571)
AA seq 1159 aa
MSYDFKSFVHLRVHSEFSIVDGIVRIEELINLVKDSDQPAVALTDLSNVFGIIKFYKAAR
ASGIKPIIGCDVWLTNDKNRDRPFRVLLLVCNHEGYLNLCSLLTKSFLCNQYNGRVELRK
EWLSGQNGLIVLSGGILGDIAYALEINNQVLALDLAKQWKLMFPNSFYIELQRAGFPGED
NYNHMVLELASKLNLPVVATHPIQFLRPSEFQSHEVRVCIAEGSHLSDPKRVSRFREEQY
FLNSEKMFNMFSDIPSAILNTVEIAKRCSLTLRLGIPNLPKFEIDAKYSLDDYLILMAEM
GLKRRFDFLGNNKINKKIYHERLREECGTINQMGFAGYFLIVQDFINWGKNNGVPVGPGR
GSGAGSLVAYALGITDINPMDYDLLFERFLNPERVSMPDFDIDFCQDNRDRVIDYVKSKY
GHDAVSQIATFGTFGAKAVIRDVGRVLGIPYSLCDGLSKLIPFSVSEQWTLDKVLSSDAI
FKNRYEKEEEVKTLIDIAKPLEGLARNVGMHAGGVLIAPGKLTDFCPLYCQPGQENSLVS
QFDKDDVESSGLVKFDFLGLRNLTVLDWSASYVRQCNKGMDDFSVISLPLDDKETYDLLS
SGNTVAVFQLESKGMRELLKRLKPSNFEDIIAVLALYRPGPLESGMVNDFVSRKHGVSSI
NYFHSDLENVLKSTYGVIVYQEQVMLISQIIGGYSLGSADLLRRAMGKKDPEEMAKHRII
FEKGAVNNGYRSDLAVKLFDLMEKFAGYGFNKSHSAAYALIAYQTAWLKTHHPAEFFSAT
LSSDMDDTDKIQVIFRDAKKNNIKILPPDINLSSFRFEPVVNFTDENKEIAIRYGLGAIK
GAGKSAIDDVVRSRKNNGPFSDIFDFCYRMFKILNRRAIESLIKSGAFDFSNSNRAEVLA
SLNIALEIAEHRNTNVNQSSLFEDDYEQEIPRLRKSIDNIAEWDLLNKLTEEKTAMGYHF
SGHLFEYWRDEIRQIIPTTLSKIRSSKQSQLVCGILVSIKTITTRRGKMVLALIDDDTNQ
VEIVTHQDFYEKNKNDLREDNLIAAKVIVSDDSYSNSFRIVVEQIYSIDDIRSYMAKAVK
ISIDSDINLESLQSLLKSICSKKEQDKCRVPVYVAYTNLDGKFSCTVKLGDNWRVIVNNE
FLLKLRSFLGGKGSVEILY
NT seq 3480 nt   +upstreamnt  +downstreamnt
atgtcttatgattttaaatcttttgtgcatctgcgtgtacattcagaattctctattgta
gatggtatagttcgaatagaagaattgattaacttagtaaaagattctgatcagccagct
gtagccttaacagacttatctaatgtttttggtatcataaagttttataaagcagctcgt
gcttcgggtataaaacctataattggttgtgatgtttggttaactaatgataaaaatagg
gataggcctttccgtgtcttattgcttgtttgtaatcatgaggggtacctcaacctgtgt
tctttacttacaaagtcttttttatgcaatcagtataatggtagagttgaattgcgtaag
gagtggttatcaggacagaatggcttaatagttctttcaggtggtattcttggtgatatt
gcatatgctctagagattaataatcaagttttagctttagatttagcaaaacaatggaaa
ctaatgtttcctaattctttttacatagaattacagagggctggttttcctggagaagac
aattataaccatatggtattagaattggcctcaaaattaaatttgcctgttgttgctact
catcctattcaatttctaaggcctagcgaatttcagtctcatgaagttagggtttgtatc
gctgaaggctctcatctttcagaccccaaaagagtaagtcgtttcagagaggagcaatat
ttccttaattcagagaagatgtttaatatgttttctgatataccttcggcgatacttaat
acagttgaaatagctaaacgttgcagtttaacactgcgcttagggattcctaacttacca
aaatttgaaatagatgccaaatattccctggatgattatttgatactaatggctgaaatg
ggtttaaagagaagatttgattttttaggaaacaataaaatcaataagaagatatatcat
gaaagattgcgcgaagaatgcggcactataaatcagatgggatttgctggctacttccta
atagtacaggattttattaattggggtaaaaataacggggttccagtaggtccaggtcgt
ggatcaggcgcaggatctttagtagcttatgctttgggtattactgacatcaatcctatg
gattatgatttgctttttgagcgttttctaaatcctgagcgagtatcaatgcctgatttt
gatattgatttttgccaagacaatcgtgatcgtgtgatagattatgtaaaatcaaaatat
ggccacgatgctgttagtcaaatagccacgtttggtacttttggggctaaggcagttatt
agagatgttggaagagttttaggaattccttactcgttatgtgatggcttgtcaaaattg
attcctttcagtgtatcagagcaatggacattagataaagtcttatcgtctgatgctata
tttaaaaacagatatgaaaaagaagaggaagttaagacattgatagatattgctaagcct
ttagagggattagctcgcaacgttggtatgcatgcgggaggtgttttaattgctccaggc
aagttaactgatttttgtccgttatattgtcagccagggcaagagaatagtcttgtttct
cagtttgataaagatgatgttgaatcttctggtctagttaaatttgactttttagggctg
agaaatttaactgttcttgattggtcagcaagttatgttaggcagtgtaataaaggaatg
gatgatttctctgttatttcactaccattagatgataaggaaacttatgatctattatct
agtggtaatacggttgctgtatttcagttagaatcaaaaggaatgagggagttgctaaaa
agattaaagcctagtaattttgaagatattatagccgtgctcgccttatatcggcctggt
ccactggagtcaggaatggtaaatgatttcgttagtcgtaagcatggggtctcaagcata
aattattttcatagtgatttggagaatgttcttaaaagcacttatggagttatcgtttat
caagagcaagttatgcttatttcgcagataataggtggttattctctcggtagtgctgac
ttgttgcgtagggcaatgggtaaaaaagatccagaagaaatggctaagcatcgtattatt
tttgaaaaaggagctgttaataatggttaccgctcagatcttgccgtaaaattatttgac
ttaatggagaaatttgcagggtatggatttaacaaatctcattcagctgcctatgctttg
atcgcatatcaaacagcttggctgaaaactcatcatccagcggaattcttttctgctacc
ctttcatctgatatggatgacacggataaaatacaagtaatatttcgcgatgcaaaaaag
aacaatataaaaattcttccgccagatataaatttatctagttttaggtttgagccagtt
gttaattttacagatgaaaataaagaaattgctatacgatatggtttaggagcgataaaa
ggagcaggtaaatctgctattgatgatgttgtaagatctagaaaaaacaatgggccattt
agtgacatatttgatttctgttacagaatgtttaaaattctaaatcgtcgtgcaatagaa
tctttgattaagtcaggagcttttgatttttctaattctaacagggctgaagtcttggct
tcattaaatatagcattagaaatagcagagcataggaatactaatgttaatcaatcatct
ttattcgaagatgattatgaacaagaaatacctagattgcgaaagagtatagataatata
gctgagtgggatttactaaataagcttactgaagagaaaactgcgatgggatatcatttc
agtgggcatttatttgaatattggcgtgatgaaataagacagattataccgaccacttta
tcaaaaatacgatccagcaagcaatcacagttagtatgtggcatacttgtgtcaataaaa
accataacaactcgtcgcgggaaaatggttttagccttgattgatgatgatacaaatcaa
gttgaaatagttacacaccaagacttttatgaaaaaaacaagaatgatttgcgcgaggat
aacttaatagctgctaaagtcattgttagtgacgattcgtattctaatagttttcgaatt
gttgtggagcaaatatatagcattgatgatattaggtcttacatggctaaagccgtaaaa
atatctatagatagtgatattaatttggaatctttgcagagcttattaaagagcatatgc
tcaaaaaaagaacaagataaatgtcgtgtaccagtttacgtggcttatacaaacctagat
ggcaaattttcatgtactgtaaaattaggtgataattggagagttattgttaataatgag
tttttgttaaaattacgatcttttttaggtggtaaaggatctgttgagatcttatactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system