KEGG   Dokdonia sp. 4H-3-7-5: Krodi_1668
Entry
Krodi_1668        CDS       T01484                                 
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
kdi  Dokdonia sp. 4H-3-7-5
Pathway
kdi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kdi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Krodi_1668
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kdi03019]
    Krodi_1668
   03110 Chaperones and folding catalysts [BR:kdi03110]
    Krodi_1668
   03029 Mitochondrial biogenesis [BR:kdi03029]
    Krodi_1668
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:kdi04147]
    Krodi_1668
Enzymes [BR:kdi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     Krodi_1668
Messenger RNA biogenesis [BR:kdi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Krodi_1668
Chaperones and folding catalysts [BR:kdi03110]
 Heat shock proteins
  HSP60 / Chaperonin
   Krodi_1668
Mitochondrial biogenesis [BR:kdi03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    Krodi_1668
Exosome [BR:kdi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Krodi_1668
  Exosomal proteins of other body fluids (saliva and urine)
   Krodi_1668
  Exosomal proteins of breast cancer cells
   Krodi_1668
  Exosomal proteins of colorectal cancer cells
   Krodi_1668
  Exosomal proteins of bladder cancer cells
   Krodi_1668
SSDB
Motif
Pfam: Cpn60_TCP1 Pho88
Other DBs
NCBI-ProteinID: AEE19651
UniProt: F4B2Q1
Position
complement(1895420..1897051)
AA seq 543 aa
MAKDITFNIEARDGLKRGVDKLANAVKVTLGPKGRNVIISKSFGAPQVTKDGVTVAKEIE
LEDALENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVTEGLKNVAAGANPMDLKRGID
KAVEAIVADLEKQTTKVGNSSDKIKQVASISANNDDVIGDLIAQAFGKVGKEGVITVEEA
KGTETYVDVVEGMQFDRGFLSPYFVTNSEKMSAELEQPYILLFDKKISNMKDLLPVLEPV
AQTGKPLLIIAEDVDGEALATLVVNKLRGALKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGFTLENATLDMLGTAETVSIDKDNTTIVNGAGDSKIIKARVGQIKSQIETTTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV
RAKKALEKIKTENADEATGVQIVNRAIEAPIRTIVSNAGGEGAVVISKVMEGKKDFGFNA
KNGEYTDMLKAGIIDPKKVTRVALENAASVSGMILTTECALTDIKEDAPAMPPMGGGGMP
GMM
NT seq 1632 nt   +upstreamnt  +downstreamnt
atggcaaaagacataacatttaatatagaagcacgcgacggtttaaaacgcggcgtagat
aaactagcaaacgcagtaaaagttactttaggacctaaaggtcgtaacgtgattatttca
aaatcatttggcgcaccacaggtgactaaagatggtgtaacagttgcaaaagaaattgaa
ctggaagacgctctagaaaacatgggagctcaaatggtaaaagaagtagcttctaagact
aacgatcttgctggagatggaacaactaccgctacagttcttgctcaggcaatcgttact
gaaggacttaaaaacgttgctgcaggagcaaacccaatggatcttaagcgcggtatcgat
aaagctgtagaagctatcgttgcagatcttgagaagcaaactactaaagtgggtaactct
tctgataaaatcaaacaagtagcatctatctctgcaaacaatgatgatgtaataggtgat
cttattgctcaagcatttggaaaagtaggaaaagaaggtgttattactgttgaagaagca
aaaggaactgaaacatatgtagatgttgtagaaggtatgcagtttgaccgtggattcctt
tctccttacttcgttactaatagtgagaaaatgagtgcagaacttgagcagccatatatc
ttactttttgacaagaagatttcaaacatgaaagatttgctacctgtacttgagcctgta
gctcaaactggaaagccacttcttatcattgcagaggatgtagacggagaagcactagca
acattagtagtaaataaattacgtggagctcttaaaattgctgctgtaaaagcaccaggt
tttggagatcgtcgtaaagctatgttagaagacatcgcaattcttactggaggtactgta
atctcagaagagagaggtttcactttagaaaatgcgacacttgatatgctaggtacggca
gagactgtatctatagacaaggataacactacgattgtaaacggagctggagattcaaaa
attattaaagctcgtgtaggtcaaatcaaatctcagattgagactactacatctgattat
gataaggaaaaacttcaagaacgcttagctaaacttgctggaggtgttgctgtactatat
gtaggtgctgcttctgaagttgagatgaaagaaaagaaagaccgtgtagatgatgcttta
catgcaactcgcgcagctgtagaagaaggtatcgtagctggaggtggtgttgcacttgtg
cgcgcaaagaaagctcttgagaaaatcaaaacagaaaatgcagatgaagcaactggtgta
cagattgtaaatcgcgctattgaagcacctatacgcactatcgtttctaacgctggtggt
gaaggagctgttgtaatttctaaagttatggaaggcaaaaaagacttcggttttaatgct
aaaaatggcgagtatacagacatgcttaaagctggtattatcgatcctaaaaaagtaaca
cgtgtagcgcttgagaatgctgcttctgtttcaggaatgattcttactactgagtgtgca
cttacagatattaaagaagatgcacctgcaatgcctcctatgggaggtggcggaatgcca
ggaatgatgtaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (96)   
   KEGG ORTHOLOGY (1)   
   RefGene (93)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (108)   

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