KEGG T04893: S101446

Komagataeibacter europaeus: S101446_02624

Entry

S101446_02624     CDS       T04893

Name

(GenBank) RNA helicase

K05592

ATP-dependent RNA helicase DeaD [EC:5.6.2.7]

Organism

keu Komagataeibacter europaeus

Pathway

keu03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:keu00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    S101446_02624
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:keu03019]
    S101446_02624
   03009 Ribosome biogenesis [BR:keu03009]
    S101446_02624
Enzymes [BR:keu01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     S101446_02624
Messenger RNA biogenesis [BR:keu03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     S101446_02624
Ribosome biogenesis [BR:keu03009]
Prokaryotic type
  rRNA helicases
   S101446_02624

SSDB

Motif

Pfam:

DEAD Helicase_C DbpA ResIII CMS1

Other DBs

NCBI-ProteinID:

ARW17716

Position

complement(2827144..2828910)

AA seq 588 aa
MPFPETHPALQRALDERGYDNPTPVQTAVLDVAAEGRDLLVSAQTGSGKTVAFGLAMADT
LLGGAERFGPAGPPLAVIIAPTRELAMQVTRELTWLYAPAGGRIVSCIGGMDARREARAL
QMGAHIVVGTPGRLCDHLSRGRLDMSQLRVVVLDEADEMLDLGFRDELEQLLDAMPKTRR
TLLFSATIAKEIASLARRYQNDAVRIDTLSGAKQHADIEYRAVVADARELIPAVVNVLRY
TDSQTTMVFCATREMVRHMQAALVERGFSSVALSGELGQNERTRAIDSLRKGQANVCVAT
DVAARGIDIPALALVIHATLPTDPATLLHRSGRTGRAGRKGVCVLMVPMSQRRRAERLMQ
GAKITATWSGVPTAADIRANDAKRLLADPVLNEDVAEADRELVGQLVEGRTSEQLAAALL
QMYRARLPAPENVRHITPDAPRPVRERSERDGPRPTRDSYASAEPGAWFAMNVGRQEKAD
PKWLIPLICRLGGVRKADIGAIRINDNQTLFEITPDSTEKFRSCIAAIENDEVQITPASA
PAGGGARRGGPPPRGGRPFGRKPGGGRPGGGFGGPPRGGASSRKRPRS

NT seq 1767 nt +upstreamnt +downstreamnt
atgccgtttcccgaaacccaccccgccctgcaacgcgcgctggacgagcgtgggtacgac
aaccccacccccgtccagacagccgtgctggatgtcgccgccgaagggcgcgacctgctt
gtttccgcccagaccgggtcgggcaagaccgtcgccttcggtctggccatggccgatacc
ctgctgggtggggccgaacgctttggcccggcgggaccgccgctggccgtcatcatcgcg
ccgacacgcgaactggccatgcaggtcacgcgtgaactgacgtggctgtatgcgcccgcg
ggcggccgtatcgtatcgtgcattggcggcatggacgcgcggcgtgaagcccgtgccctg
cagatgggcgcgcatatcgtggtcggcacgcccggccggctgtgcgatcatctgtcgcgt
gggcgtctggacatgtcccagctgcgcgtggtcgtgctggatgaagcggacgagatgctt
gatctcggcttccgtgacgagcttgagcagctgcttgacgccatgcccaagacacggcgc
acgctgctgttctcggccaccatcgccaaggaaatcgcatcgctggcgcgtcgttaccag
aacgacgccgtgcgcatcgataccctgtcgggcgccaagcagcatgccgatatcgaatac
cgcgccgtcgtggccgatgcgcgcgaactgatccccgccgtggtcaacgtgctgcgctat
accgacagccagaccaccatggtgttttgcgccacgcgcgaaatggtgcgccatatgcag
gcggcactggtcgaacgcggcttctcctccgtcgccttgtcgggtgaactgggccagaac
gagcgcacgcgcgccatcgacagtctgcgcaagggccaggccaatgtgtgtgtcgccacc
gacgtggccgcccgtggcattgatattcccgcgctggcgctggtgatccatgcgaccctg
ccgaccgatccggccaccctgctgcaccgttcgggccgcacgggacgtgcggggcgcaag
ggtgtgtgcgtgctgatggtgcccatgtcgcagcgccgccgtgccgaacgcctgatgcag
ggcgcaaagatcacggccacatggtccggcgtgccgacggcagccgatatccgcgccaat
gatgccaagcgcctgctggccgatcccgtcctgaacgaggacgtggccgaagcggacagg
gaactggttggccagctggttgaaggccgcaccagcgaacagctggcagccgccctgctg
cagatgtaccgcgcccgcctgcccgcgcccgaaaacgtgcgccacatcacgccagacgcc
ccccgtcccgtgcgtgagcgcagcgagcgtgacggcccccgccccacccgcgacagttat
gccagcgccgaaccgggcgcatggttcgccatgaatgtgggccggcaggaaaaagctgat
cccaagtggctgatcccgctgatctgccgccttggcggcgtgcgcaaggcggatatcggt
gcgatccgcatcaacgataaccagaccctgttcgagatcaccccggattcaaccgagaaa
ttccgttcgtgcattgccgcgatcgagaatgacgaagtgcagatcacacctgccagcgca
ccggctggcggcggcgcacgtcgtggtgggccgccgccgcgtggcgggcgtccgttcggg
cgcaagcccggtggtggtcgccccggtggcgggtttggcgggccgccacgcggtggcgcg
tcttcacgcaagcgtccgcgttcgtaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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