KEGG   Phytobacter ursingii: AB182_21035
Entry
AB182_21035       CDS       T03950                                 
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
kin  Phytobacter ursingii
Pathway
kin03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kin00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AB182_21035 (pcnB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kin03019]
    AB182_21035 (pcnB)
Enzymes [BR:kin01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     AB182_21035 (pcnB)
Messenger RNA biogenesis [BR:kin03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     AB182_21035 (pcnB)
SSDB
Motif
Pfam: PolyA_pol_arg_C PolyA_pol PolyA_pol_RNAbd
Other DBs
NCBI-ProteinID: AKL13623
Position
3698496..3699860
AA seq 454 aa
MLSREESMVVEAIVQPQMTVIPREQHAISRKDISENALKVLYRLNKAGYEAYLVGGGVRD
LLLGKKPKDFDVTTNATPDQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEDTE
ADRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVADFTVRDYVGGMRDLEEGV
IRLIGNPETRYREDPVRMLRAVRFAAKLGMAISAETAEPIPRLAALINDVPPARLFEESL
KLLQAGYGFDTYTLLREYNLFQPLFPTISRFFTENGDSPMERIIAQVLKNTDTRIHNDMR
VNPAFLFAAMFWYPLLETAQRITQEGGLAYYDAFALAMNDVLDEACRSLAIPKRITSLIR
DIWQLQLRMSRRQGKRAWKLMEHPKFRAAYDLLALRAEVENNGELQRLVKWWGEFQVSAP
PEQKDMLDDLGDEPAVRRRHRRPRKRAPRREGSA
NT seq 1365 nt   +upstreamnt  +downstreamnt
gtgctaagccgcgaagagagcatggtcgttgaggctatcgtacaacctcagatgacggtt
atcccgcgtgaacagcacgctatttcacgcaaagatatcagtgaaaatgcgctcaaggtc
ctctaccgcctgaacaaagccggttatgaggcttatctcgtcggtggtggcgtgcgtgat
ttattgctgggcaaaaaaccaaaagattttgacgtcacgacgaacgccacgccggaccag
gtgcgtaaattattccgcaactgtcgcctggtgggtcgccgtttccgcctcgcccacgtt
atgtttgggccagaaatcatcgaagtcgcgacctttcgtggtcatcacgaagataccgaa
gccgaccgcaccacgtctcagcgtgggcaaaatggcatgttgctgcgcgacaatattttc
ggttctatcgaagaagacgcccagcgtcgcgatttcaccattaacagtctttattacagc
gtagctgacttcaccgtacgtgattatgttggcggcatgcgcgatctggaagaaggcgtc
attcgcctgattgggaacccggaaacccgctatcgcgaagacccggtacgcatgttgcgt
gcggtgcgtttcgccgccaagctggggatggcgatcagcgcggagaccgccgaacccatt
cctcgtctggccgccctgatcaacgacgttcctcctgcgcgcctgtttgaagagtcgctg
aaattactgcaggcgggctatggttttgatacctacaccttgctgcgtgaatacaatctc
ttccagcctctgttcccaaccatcagccgcttcttcaccgaaaacggtgacagcccgatg
gaacgcatcattgctcaggtactgaaaaacaccgatacccgtattcacaacgatatgcgt
gttaatccggcgtttttgtttgccgctatgttctggtatccgctgctggaaaccgcacag
cgtattacccaggaaggcggccttgcgtattacgacgcctttgcgcttgccatgaatgat
gtgcttgatgaagcctgccgttcactggccattccgaaacgcatcacctcgctgattcgc
gatatctggcagctccagttgcgtatgtcccgccgtcagggtaaacgcgcgtggaaactg
atggagcatccaaaattccgggcggcctacgatctgctggccctgcgtgccgaggtggaa
aacaacggtgaactgcagcgcctggtgaaatggtggggagaatttcaggtttccgcaccg
ccggagcagaaagatatgcttgacgaccttggcgatgaacccgctgttcgtcgtcgccac
cgccgaccgcgcaaacgcgcgcctcgccgtgaaggcagcgcgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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