KEGG   Kangiella koreensis: Kkor_0462
Entry
Kkor_0462         CDS       T00973                                 
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
kko  Kangiella koreensis
Pathway
kko03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:kko00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Kkor_0462
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kko03021]
    Kkor_0462
   03400 DNA repair and recombination proteins [BR:kko03400]
    Kkor_0462
Enzymes [BR:kko01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Kkor_0462
Transcription machinery [BR:kko03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Kkor_0462
DNA repair and recombination proteins [BR:kko03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Kkor_0462
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2
Other DBs
NCBI-ProteinID: ACV25882
UniProt: C7R8A0
Position
475888..476868
AA seq 326 aa
MSATEFLTPRQIKVESSEGTKARVVLEPFERGFGHTLGNSLRRILLSSMPGAAVTEVEID
GVLHEYSAIEGVQEDVIDILLNLKGLAVRLEDKEVATLTLQKKGEGVVTAADIEEVSGTE
VVNKDHYIATLNKGGALNMRIKIRLGRGYEASNTRKQPEGEDKAIGVLQVDASFSPMKKV
SYTVESARVEQRTDLDKLVLDLETNGTIDPEEAIRRSATILQEQLAAFVDLKDEKQAEPE
KEEPEIDPILLRPVDDLELTVRSANCLKTENIHYIGDLVQRTEVELLKTPNLGKKSLTEI
KDVLASRGLSLGMRLENWPPSSILGD
NT seq 981 nt   +upstreamnt  +downstreamnt
atgtcagcgactgaatttctgactccgcgccaaattaaggttgaatcaagcgaaggcaca
aaagccagagttgtacttgaaccttttgagcgtggttttggacacactttgggtaactca
ctacgtcgcatcttgctatcttctatgccaggtgccgcagtgacagaagtagaaatcgac
ggtgttcttcatgagtactcagctattgagggcgttcaagaagacgttatcgatatcctt
ttgaacttaaaagggttggctgttcgccttgaagataaagaagtagctactttaactctt
cagaaaaaaggtgaaggcgtcgtgactgctgctgacattgaagaagtatcaggcactgaa
gtggtcaacaaagatcactacatcgctaccttgaataaaggtggtgcattgaatatgcgc
attaaaattcgcctagggcgtggttacgaggcttctaatactcgtaaacaacctgagggt
gaagataaagcaattggtgtattacaagttgatgcttctttcagcccaatgaagaaagtt
tcctacacagtcgagtcggctcgtgtagagcaacgtacagatttggacaagcttgtttta
gaccttgaaacaaatggtactattgacccagaagaagcgattcgccgtagcgcaacgatt
cttcaggaacaattggcagcattcgttgacttaaaagatgaaaaacaagctgagccagag
aaagaagaaccagaaatcgacccgatcctattgcgtccggttgatgatctggagctgact
gttcgttctgctaattgtcttaaaactgagaatatccattatattggtgacttggtacag
cgcactgaagttgagttgcttaaaactcctaaccttggtaagaagtctttaactgaaatt
aaagacgttcttgcatcacgtggtttgtctttgggtatgcgtttagagaattggccacca
tcaagtattcttggtgactaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (32)   

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