KEGG   Kangiella koreensis: Kkor_2593
Entry
Kkor_2593         CDS       T00973                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
kko  Kangiella koreensis
Pathway
kko03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kko00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Kkor_2593
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kko03021]
    Kkor_2593
   03019 Messenger RNA biogenesis [BR:kko03019]
    Kkor_2593
Transcription machinery [BR:kko03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     Kkor_2593
Messenger RNA biogenesis [BR:kko03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Kkor_2593
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB NACHT Spore_III_AA AAA_22 AAA AAA_25
Other DBs
NCBI-ProteinID: ACV28001
UniProt: C7R9Y2
Position
complement(2795512..2796768)
AA seq 418 aa
MNLTELKQKSAQDLSEMAKAVGLDHMARMRKQDIIFGLLKNHAKSGEDIFGGGVLEILPD
GFGFLRSAEGSYLAGPDDIYVSPSQIRRFNLRTGDTIFGKIRPPKDGERYFALLKVAEIN
YDSPENSRNKLLFENLTPLHPDERIRMERGNGSTEDITARVIDLAAPIGKGQRGLIVSPP
KAGKTMILQNIAQSITSNNPECMLIVLLIDERPEEVTEMQRSVKGEVVASTFDEPAARHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLSRKISEKRVFPAIDF
NRSGTRKEDLLTSPEELQKNWILRKILHPMDEIDAIEFLIDKIALTKTNDEFFDAMKR
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgaatctaactgaattaaagcaaaagtcagctcaagatctgtctgaaatggcgaaagcc
gtaggtcttgaccacatggcgcgtatgcgcaaacaagatatcatcttcggtctactgaaa
aatcacgccaaaagtggtgaagatattttcggtggcggtgttctcgaaatccttcctgat
ggttttggtttcctgcgttccgctgaaggctcttacttggctgggccggatgacatctac
gtttccccaagccaaatcagacgctttaacctgcgaacgggcgataccattttcggcaaa
attcgcccaccgaaagacggtgaacgatactttgccctacttaaagtcgcagaaatcaat
tacgacagcccggaaaactctcgcaacaaacttctcttcgaaaaccttacccctctccac
ccagacgaacgtattcgtatggaacgaggcaatggttcaaccgaagatattaccgctcgt
gtaattgacctggcagcacctatcggtaaaggacagcgcggattaatcgtatcgccacct
aaagccggtaagaccatgattttgcagaacatagcccaatcaattaccagtaataatcca
gaatgcatgctaattgtattgctgattgatgagcgtccagaagaagtaacagaaatgcag
cgttcggtgaaaggtgaagtagttgcttcaacctttgacgaaccagccgcacgacacgtt
caagttgccgaaatggttatcgaaaaagctaagcgcttagtagagcataagaaagacgtt
attattttgctcgactcgattactcgtctagcacgtgcttacaacacagtagtgccatca
tccggtaaagtattaaccggtggtgtcgacgctaacgcattacagcgcccaaaacgattc
ttcggtgccgcacgtaatattgaagaaggtggcagcttaaccattatcgcaaccgcacta
gtagataccggttcaaaaatggacgaagtgatctacgaagagttcaaaggtaccggtaac
atggaactgcatctttcgcgtaaaatttccgagaagcgcgtgttcccagcaatcgacttc
aaccgctcaggtacgcgaaaagaagacttgctaacctcgccagaagaactgcaaaagaac
tggatactgcgcaagattctacatccaatggatgagatcgatgcgattgagtttttgatc
gataagattgcgttgacgaagacgaatgatgagttttttgacgccatgaaaagatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (33)   

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