KEGG   Kryptolebias marmoratus (mangrove rivulus): 108240764
Entry
108240764         CDS       T05608                                 
Symbol
pex1
Name
(RefSeq) peroxisome biogenesis factor 1 isoform X1
  KO
K13338  peroxin-1
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04146  Peroxisome
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    108240764 (pex1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:kmr04131]
    108240764 (pex1)
Membrane trafficking [BR:kmr04131]
 Autophagy
  Pexophagy
   Other pexophagy associated proteins
    108240764 (pex1)
SSDB
Motif
Pfam: AAA PEX-2N PEX-1N AAA_lid_3 AAA_22 AAA_16 AAA_14 nSTAND3 NACHT DUF815 RNA_helicase ABC_tran AAA_5 AAA_18 AAA_28 ATP-synt_ab AAA_33 TIP49 AAA_7 Bac_DnaA AAA_29 Sigma54_activ_2 Zeta_toxin AAA_19 RuvB_N Vps4_C IstB_IS21 AAA_3 P-loop_TraG
Other DBs
NCBI-GeneID: 108240764
NCBI-ProteinID: XP_017279983
UniProt: A0A3Q2ZK23
Position
LG5:11710810..11721500
AA seq 1251 aa
MFTNQGIQPVSVNFNNAKNCFLHLPPKLISHLSLNENQALELSWGSESPVFLSWTQNNSS
SDPDSGKVELCRQLGEKLGLKDGEQGFLRPCLQVSSLNQAFVEPLSADDWEILELHSSAL
EQQLLDQIRVVFQDAVFPVWVDNHTVIYIRITSIFPSVPYGRLEQFTELVVSPKVRAGVG
NLSGSLERFGHKQQNSNLSSSSEPSSDSTSRIPQSQQWGGIADFKSLIRYMIKGAYDAVK
EQPLVPNIPVFSDSIYRVCGAPPDSLCSVSHIATSGVHVFPWNPRVNATLRGGQSAVTYG
LLSKVLSPKEAKDRIKRAMEKKKSVSVGKDGAAGQGGEEVTAEEVTAEEEAAVVRVVCHV
TETLAGERRGHEIHSGRVWIPQPLASKLKIQPHSAVRIKPVRSTIKVASNVCLQPLKSSL
EENDEEIQTAFLSWLHTQSHEPLACLTARSGSILLHGSDAKLELVLTVLKPEAQSDPPDQ
LFLLAPTVLQKEDIQVDRQAAAEPAMKVVEEPSDPELPSLCILGGIDELIRTGIEFISHN
LLGTPLSTQLCTAGEGLRGGALLITGAKGSGKSMLSRALCRKAREELDAHVEVVDCKKLQ
GKRADTVRQILQEVFEQAEWRQPSVVLLDDLDHLTHAPTSPEHEHGPEALLQQHIAQNLQ
DVVDEAVARSSLVCLVLTSQSEHTLHPSLTQVQGSHFIQGFVNIQPPDQAQRAEILHHLI
LRWSSLCEETVRTLDLRAVAKETEGYTAQDLALLVERAVHANASRTAPPSEQGACLSWRD
FVQALSGFTPPSLWGVDLHTPTGVGLERVGGLREVRQQLMDTVLLPAKYPILFSHLPIRH
RSGVLLYGAPGTGKTLLIRAVAKDSAMNFISIKGPELLSKYIGASEQGVRDVFRRAQAVK
PCILFFDEFDSLAPRRGHDSTGVTDRVVNQLLTELDGVEGLQGVYVLAATSRPDLIDPAL
LRPGRLDKSLYCPPPDQEARVEILKALSSGLSLAPDVDLEQLAAATERFTGADLKALLYN
AQLEAVHSSPGAGPSQELASGSDSDMSLSAMMFPNNSSDDSVGEGDPGVGLDQSMVLLEP
SELQAEDKPSHSNVWRLYFGSLYESESGNSPVSRRNSQCLSGPNSTPHDLPGGPIQEPVS
TLPPAFMSSIQTGYKELGSEQMEHLLQDVQIIKNNCRRANEECVWTRPASSQPGLLLSQA
HINAALAASRPSLSQADWSRYTKLYEDFGGSGDRKCLPSVSFTPGQRVTLA
NT seq 3756 nt   +upstreamnt  +downstreamnt
atgtttactaatcagggcatccaacctgtaagtgttaatttcaacaacgcaaaaaactgc
tttctgcacctccccccgaagttgatatcgcacctgtccctaaacgagaaccaggctttg
gagttgtcctggggcagtgaatctccagtattcctcagctggactcaaaataattcatcc
tctgacccagacagtggcaaagtggaactatgtcgacaactgggagagaagctgggcttg
aaggatggagagcagggctttctaaggccgtgtcttcaagtctcatcactgaaccaggcg
tttgtggagcctctgtcagctgatgactgggagatcttggagctccacagttcggcactg
gagcagcaacttctggatcagatcagagtggttttccaagatgccgtgtttcctgtttgg
gtggacaatcacaccgtgatttacatcagaataacttcaattttcccatctgtgccctac
ggtcgcctggagcagttcactgaacttgtggtgtcgccgaaggtccgtgctggagtcggc
aacctcagtggttctcttgagagatttggccacaagcagcagaactcaaatctctcctcc
tcctctgagccgtcgtcagattctacctcccgtatccctcaaagccaacagtggggtggt
atcgctgacttcaagagcctgattcgatatatgataaagggcgcttatgacgcagttaag
gagcagccgcttgtacccaacattcccgtcttctcggactctatctacagagtgtgtggc
gcgcctcctgactccctttgttccgtaagccacatcgctaccagtggtgttcacgttttc
ccctggaaccctcgtgtaaacgccacgctaagaggaggtcagtctgccgtgacgtacggc
ctcctctccaaggttttatctcctaaagaagcaaaagaccgaatcaagcgggccatggag
aaaaagaagagtgtcagtgttggcaaagatggcgccgctggtcaaggaggagaggaggtg
acggcggaggaggtgacggcggaggaggaagctgcggtggtcagggttgtgtgtcacgtc
actgagacgctggcaggtgagaggagagggcacgagattcatagtggaagagtctggatt
ccacagcctctggccagcaagttgaaaatccagccacattcagcagtgagaattaaacca
gtgaggtcaacaatcaaagtcgcctctaatgtttgtctgcagcctttaaaatcatcgctc
gaggagaatgatgaagagatccagacagcgttcctcagctggctgcacactcagagtcac
gaacctctggcctgtctgacggctcgttctggctccatcctcctccacggaagtgatgcg
aagttggagttggtgttaaccgttctgaaaccagaggctcagagcgatccaccagaccag
ctttttctactcgcccccactgtgctccagaaggaggacatacaggtggacagacaggca
gcagcagagcctgcaatgaaagttgtagaagaaccgtccgacccagagctcccctccctc
tgtattcttggtgggattgacgagcttatcagaactggaattgagttcatttcccacaac
cttctgggtacccccctgtcgacacagctctgtacagctggtgagggactccgaggagga
gcactgctcatcactggggctaagggcagtgggaagagcatgttgtcccgagctctctgc
agaaaagccagagaggagctagatgcacacgtagaggtggtggactgcaagaagctgcaa
ggcaagagggcagacactgtgcgacagattctgcaggaggtttttgagcaggcagagtgg
aggcagccctctgttgttttacttgacgacttggatcatttgacgcacgcaccgacctcc
cctgagcacgagcacgggccggaggcgctgctgcagcagcacatcgcacagaatctgcag
gatgtggtcgacgaggcggtggctcgctccagcctggtgtgtctggtcctcaccagtcag
agtgaacacactcttcacccttcgctcactcaggtgcagggctcccacttcatccagggc
ttcgttaacatccagccgccggaccaggctcagagagctgagattctgcaccatctcatc
ctgaggtggtcctccctgtgtgaggagaccgtacgcactctggacctgcgggctgttgct
aaggagaccgaggggtacacggcccaagatctcgctctgctggtggagcgtgccgtccac
gctaacgcatcgcgaacagcccccccgagtgagcagggtgcctgtctgtcatggagggac
tttgttcaggctctgagcgggttcacgcctccttcgctgtggggagtcgaccttcacacg
ccaactggagtcgggctggagagggtaggagggctgagggaggtgcggcagcagctaatg
gacaccgttctgctccccgcgaagtatcccatcctcttctcccatctcccgatccggcat
cgctctggagttctgctgtacggagctcctggaacggggaagacgctgctgatcagagcc
gtggccaaagacagcgctatgaacttcatcagtatcaagggacctgagctcctgagtaaa
tacatcggcgccagcgagcagggcgtgcgtgacgtcttcaggagggcccaagccgtcaaa
ccttgcatcctgttcttcgatgagttcgactctctggccccgaggaggggccacgatagc
acgggtgtgacggaccgggtggtcaatcagctcctcactgagctggatggcgtggaagga
ctacagggtgtttatgtgctcgcagccaccagccgtccagatctaatcgacccggctctg
ctgagacccggacgactggacaagtccctctactgccctcctccagaccaggaggctcgt
gtcgagatcctgaaggctctgagttctggcctctctctggctccagatgttgacctggaa
cagctggcagcagcgacggagcggttcacgggggcggacctgaaggccttgctctacaac
gcacagctggaggcggtccacagcagcccaggcgccggcccatcacaggagctggcctcc
ggctccgacagcgacatgagcctgtccgccatgatgttcccgaacaacagttcggacgac
tctgtgggcgagggcgaccccggcgtgggcctggaccaatccatggttctcctcgagccc
agcgagctccaggcggaggacaaaccgtcccacagcaacgtctggaggctgtacttcgga
agcttgtacgagtcagagagtggaaattctcccgtttcaagacggaactcccagtgctta
tctgggcccaactccacgcctcacgaccttccggggggaccgatccaagagccggtcagc
acgctgcctcctgctttcatgtcctccatccagacgggctacaaggagctgggctctgag
cagatggagcatctgctgcaagacgtccagatcatcaagaacaactgcaggagagccaat
gaagagtgtgtgtggacacgtccagcctccagccagccgggcctgctgctgtctcaggct
cacattaacgctgccctggctgcgagcagaccgtctctgagccaggccgactggagcaga
tacacaaaactgtatgaagactttggcggttcaggagacagaaaatgtcttccttccgtc
tcttttacaccaggacaacgtgtgactttagcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (29)   
   Pfam (29)   
All databases (42)   

Download RDF
DBGET integrated database retrieval system