KEGG   ORTHOLOGY: K14328Help
Entry
K14328                      KO                                     
Name
UPF3, RENT3
Definition
regulator of nonsense transcripts 3
Pathway
RNA transport
mRNA surveillance pathway
Module
M00430  
Exon junction complex (EJC)
Disease
H00658  
Syndromic X-linked mental retardation
Brite
KEGG Orthology (KO) [BR:ko00001]
 Genetic Information Processing
  Translation
   03013 RNA transport
    K14328  UPF3, RENT3; regulator of nonsense transcripts 3
   03015 mRNA surveillance pathway
    K14328  UPF3, RENT3; regulator of nonsense transcripts 3
KEGG pathway modules [BR:ko00002]
 Structural complex
  Genetic information processing
   RNA processing
    M00430  Exon junction complex (EJC) [BR:ko03041]
     K14328  UPF3, RENT3; regulator of nonsense transcripts 3
BRITE hierarchy
Genes
HSA: 
65109(UPF3B) 65110(UPF3A)
PTR: 
452689(UPF3A) 465954(UPF3B) 750926
PPS: 
100982672(UPF3B) 100989122(UPF3A)
GGO: 
101143632(UPF3B) 101145894(UPF3A)
PON: 
100434953(UPF3A) 100435868(UPF3B)
MCC: 
694247(UPF3B) 716601
MMU: 
67031(Upf3a) 68134(Upf3b)
RNO: 
313449(Upf3b) 361176(Upf3a)
CFA: 
481031(UPF3B) 607836(UPF3A)
AML: 
FCA: 
101084940(UPF3B) 101099267(UPF3A)
BTA: 
529442(UPF3A) 616181(UPF3B)
SSC: 
100621841 414433
ECB: 
100058559 100069294
MDO: 
100019877 100020995
SHR: 
100913987(UPF3B) 100918373(UPF3A)
OAA: 
100074759 100078880
GGA: 
100858231(UPF3B) 418734(UPF3A)
MGP: 
100544564 100547310
TGU: 
100221665(UPF3B) 100224732(UPF3A)
ACS: 
100559102 100561233
XTR: 
100145010(upf3b) 100492664
DRE: 
393929(upf3b) 566608(upf3a)
TRU: 
101066409 101071745
OLA: 
101159680 101167578
BFO: 
BRAFLDRAFT_70868
CIN: 
100185236
SPU: 
574684
DME: 
Dmel_CG11184(Upf3)
DPO: 
Dpse_GA10824
DAN: 
Dana_GF12056
DER: 
Dere_GG19981
DPE: 
Dper_GL10920
DSE: 
Dsec_GM15496
DSI: 
Dsim_GD24999
DWI: 
Dwil_GK15858
DYA: 
Dyak_GE11515
DGR: 
Dgri_GH21690
DMO: 
Dmoj_GI18844
DVI: 
Dvir_GJ21877
AGA: 
AgaP_AGAP006649
AAG: 
AaeL_AAEL003735
CQU: 
CpipJ_CPIJ005437
AME: 
552225(Upf3)
TCA: 
663859
API: 
100159460
PHU: 
Phum_PHUM129450
ISC: 
IscW_ISCW010708
CEL: 
CELE_F46B6.3(smg-4)
BMY: 
Bm1_56410
SMM: 
Smp_102240
NVE: 
NEMVE_v1g115210
HMG: 
100202729
ATH: 
AT1G33980(UPF3)
ALY: 
ARALYDRAFT_473553
GMX: 
100795376 100798866 100799816 100801152
MTR: 
MTR_2g005600
CSV: 
101208317
RCU: 
RCOM_0758300 RCOM_1602680
POP: 
POPTR_780566 POPTR_827452
OSA: 
4335928
DOSA: 
Os04t0440100-01(Os04g0440100)
BDI: 
100844832
SBI: 
SORBI_06g017380(SORBIDRAFT_06g017380)
SMO: 
SELMODRAFT_119852 SELMODRAFT_97155
PPP: 
PHYPADRAFT_170493
CRE: 
CHLREDRAFT_169865(UPF3)
VCN: 
VOLCADRAFT_48819
OLU: 
OSTLU_32910
OTA: 
Ot15g01270
SCE: 
YGR072W(UPF3)
AGO: 
AGOS_AER204W
KLA: 
KLLA0D03718g
LTH: 
KLTH0C08426g
PPA: 
PAS_chr1-1_0228
VPO: 
Kpol_1053p12
ZRO: 
ZYRO0B05412g
CGR: 
CAGL0K01309g
NCS: 
NCAS_0B05240(NCAS0B05240)
NDI: 
NDAI_0B02610(NDAI0B02610)
TPF: 
TPHA_0M00500(TPHA0M00500)
TBL: 
TBLA_0F01000(TBLA0F01000)
TDL: 
TDEL_0D04830(TDEL0D04830)
KAF: 
KAFR_0C01160(KAFR0C01160)
DHA: 
DEHA2B11792g
PIC: 
PICST_67017
PGU: 
PGUG_01752
LEL: 
LELG_02206
CAL: 
CaO19.12742 CaO19.5277
CDU: 
CD36_11150
COT: 
CORT_0D06400
CLU: 
CLUG_00546
NCR: 
NCU03435
SMP: 
SMAC_08533
PAN: 
PODANSg7019
TTT: 
THITE_2123179
MTM: 
MYCTH_2311559
MGR: 
MGG_03912
FGR: 
FG01463.1
NHE: 
NECHADRAFT_89796
VAL: 
VDBG_01536
SSL: 
SS1G_13475
BFU: 
BC1G_06466
ANI: 
AN0505.2
NFI: 
NFIA_057150
AFM: 
AFUA_6G11460
AOR: 
AOR_1_736144(AO090023000434)
ANG: 
ANI_1_3126014(An01g11820)
AFV: 
AFLA_108460
ACT: 
ACLA_085130
PCS: 
Pc06g00100
CIM: 
CIMG_09816
CPW: 
CPC735_022700
PBL: 
PAAG_05256
URE: 
UREG_04730
ABE: 
ARB_01734
TVE: 
TRV_03428
AJE: 
HCAG_09005
PNO: 
SNOG_06711
PTE: 
PTT_15697
ZTR: 
MYCGRDRAFT_117814
TML: 
GSTUM_00004332001
SPO: 
SPAC13G7.03(upf3)
CNB: 
CNBG1750
CGI: 
CGB_G2380W
PPL: 
POSPLDRAFT_102449
LBC: 
LACBIDRAFT_293575
MPR: 
MPER_03460
CCI: 
CC1G_10331
SCM: 
SCHCODRAFT_109867
UMA: 
UM00233.1
MGL: 
MGL_0560
PGR: 
PGTG_11334
MBR: 
MONBRDRAFT_38659
DPP: 
DICPUDRAFT_81715
TGO: 
TGME49_115720
PIF: 
PITG_21219
 » show all
TaxonomyKoalaUniProt
Reference
  Authors
Chamieh H, Ballut L, Bonneau F, Le Hir H
  Title
NMD factors UPF2 and UPF3 bridge UPF1 to the exon junction complex and stimulate  its RNA helicase activity.
  Journal
Nat Struct Mol Biol 15:85-93 (2008)
Reference
  Authors
Chan WK, Bhalla AD, Le Hir H, Nguyen LS, Huang L, Gecz J, Wilkinson MF
  Title
A UPF3-mediated regulatory switch that maintains RNA surveillance.
  Journal
Nat Struct Mol Biol 16:747-53 (2009)
DBGET integrated database retrieval system