KEGG   Klebsiella michiganensis KCTC 1686: KOX_03630
Entry
KOX_03630         CDS       T01681                                 
Name
(GenBank) ATP-dependent RNA helicase DeaD
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
kox  Klebsiella michiganensis KCTC 1686
Pathway
kox03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kox00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KOX_03630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kox03019]
    KOX_03630
   03009 Ribosome biogenesis [BR:kox03009]
    KOX_03630
Enzymes [BR:kox01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     KOX_03630
Messenger RNA biogenesis [BR:kox03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     KOX_03630
Ribosome biogenesis [BR:kox03009]
 Prokaryotic type
  rRNA helicases
   KOX_03630
SSDB
Motif
Pfam: DEAD Helicase_C DbpA DeaD_C ResIII CMS1 DRTGG AAA_22
Other DBs
NCBI-ProteinID: AEX02465
UniProt: A0A0H3H8C2
Position
complement(760954..762906)
AA seq 650 aa
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAF
SLPLLNNIDPELRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTAYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYSSAALNGDMNQSLREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLAKIQPSAEGEELD
VETLAAALLKMAQGERPLILPPDAPMRPKREFRDRDDRFERRGDRNDRGPRGDRGGEERP
KRERRDVGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGSHSTIELPKG
MPGEVLQHFTRTRILNKPMNMQLLGDAQPRPERSGERRGGGERREGGRSFGGGERREGRG
FGGERREGGRGEGRRFSGERREGGRAPRRDDASAPRRDDSAGRRRFGGDA
NT seq 1953 nt   +upstreamnt  +downstreamnt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcccatccttgaagcg
cttaacgatctgggttacgaaaaaccatctccgatccaggctgagtgcattccgcatctg
ctgggcggccgcgacgttctgggtatggcccagacgggtagcggtaaaaccgcagcgttc
tctttaccgctgctgaacaacatcgatcctgagctgagagcaccgcagattctggtgctg
gcgccgacccgcgaactggcggtacaggttgctgaagcaatgacggaattctctaaacat
atgcgcggcgtaaacgtggttgccctgtacggcggccagcgttatgacgtgcagctgcgc
gcgctgcgtcaggggccgcaaatcgttgtcggtaccccgggtcgtctgctggaccacctg
aaacgcggtacgctggatctctctaagctgagcggtctggttctggatgaagctgacgaa
atgctgcgcatgggcttcatcgaagacgtagaaaccattatggcgcagatcccggagggt
catcagaccgctctgttctctgccaccatgccggaagccattcgccgtattacccgccgc
tttatgaaagagccgcaggaagtgcgcatccagtcgagcgtaacaactcgcccggacatc
agccagagctactggactgcttacggtatgcgtaaaaacgaagcgctggtgcgtttcctg
gaagcggaagattttgatgcggcgattatcttcgttcgtaccaaaaacgcgaccctggaa
gtggccgaagcgctggagcgtagcggttatagcagcgctgcgctgaacggcgacatgaac
cagtccctgcgtgagcagactctggagcgtctgaaagatggtcgtctggatatcctgatt
gcaaccgacgttgcggcccgtggcctggacgttgagcgtatcagcctggtggttaactac
gatatcccgatggattccgagtcttacgttcaccgtatcggccgtaccggtcgtgcgggt
cgtgctggtcgcgcgctgctgttcgttgagaaccgcgagcgtcgtctgctgcgcaatatt
gaacgtacgatgaagctgaccattccggaagttgaactgccgaacgcagaactgctgggc
aaacgccgtctggaaaaattcgcggcgaaagttcagcagcagctggaaagcagcgatctg
gatcagtaccgtgcgctgctggcgaaaatccagccgtctgccgaaggcgaagagctggac
gtggaaacgctggccgccgcgctgctgaaaatggctcagggcgaacgtccgctgatcctg
ccgccggatgcgcctatgcgtcctaagcgcgagttccgcgaccgtgacgatcgtttcgaa
cgtcgcggcgaccgtaacgatcgtggcccgcgcggcgatcgcggtggcgaagaacgtccg
aagcgtgagcgtcgtgacgttggcgatatggaactgtaccgcattgaagtgggccgtgat
gacggcgttgaagttcgtcacatcgttggcgcaattgctaacgaaggcgacatcagcagc
cgttacatcggtaacatcaagctgtttggttctcactccaccatcgaactgccgaaaggc
atgccgggcgaagtgctgcagcactttacgcgtacccgcatcctgaacaagccgatgaac
atgcagctgctgggcgatgctcagccgcgtcctgaacgcagcggcgaacgtcgtggcggc
ggcgagcgtcgtgaaggcggtcgtagcttcggcggtggtgaacgtcgtgaaggccgtggt
ttcggcggtgagcgtcgcgaaggcggccgtggtgaaggtcgtcgtttcagcggcgaacgt
cgtgaaggtggccgcgcgccgcgccgcgatgatgcttcagctccgcgtcgcgatgactcc
gcaggtcgtcgtcgtttcggtggcgatgcataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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