KEGG   Kineococcus radiotolerans: Krad_1534
Entry
Krad_1534         CDS       T00562                                 
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
kra  Kineococcus radiotolerans
Brite
KEGG Orthology (KO) [BR:kra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:kra03032]
    Krad_1534
   03400 DNA repair and recombination proteins [BR:kra03400]
    Krad_1534
Enzymes [BR:kra01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Krad_1534
DNA replication proteins [BR:kra03032]
 Prokaryotic type
  DNA Topoisomerases
   Krad_1534
DNA repair and recombination proteins [BR:kra03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Krad_1534
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c SF-assemblin DUF2332 HATPase_c_3
Other DBs
NCBI-ProteinID: ABS03022
UniProt: A6W883
Position
complement(676854..678935)
AA seq 693 aa
MTPPSPTPDDKYTAANLLVLEGLEAVRKRPGMYIGSTDSRGLMHCLWEIIDNSVDEALGG
HCSRIDVVLRRDGSVEVRDDGRGIPVDAEKRTGLSGVEVVFTHLHAGGKFGGGSYSASGG
LHGVGASVVNALSARLDVEVDRGGKTYATSFRRGTPGRYAGEGPDADFTPETGLAVVGRA
KRGVTGTRVRYWADRQIFLKEAAFSYEDLVARARQTSFLVPGLRIVLRDERSGEATEEVF
QHDGGIGEYADFLTPDAPVTSVWRLQGEDTFTETVPVLDDSGHMSPQEVTRDCVVDIALR
WGTGYDPTVRSFVNIISTPKGGSHLSGFEQGLHAAVKKQVDAQARRLKVGRDEKLEKDDV
LAGLTAVVTVRLAEPQFEGQTKEVLGTAAVRAIVRKVVENELGAVFASPKRDDKQEATAV
LDKVVAEMKSRISARLHKETQRRKNALESSSLPAKLKDCRSDDVDNTELFLVEGDSALGT
AMGARNSEYQALLPLRGKILNVQKASVTDMLKNAECASIIQVVGGGSGRSFDLSAVRYGK
IVLMTDADVDGAHIRTLLLTLFFRYMRPLIEAGRVFAAVPPLHRLEVTQPGKKGKEVVYT
YSDAELRRVTADLNRRGRSYREPQRYKGLGEMDEDQLAETTMERQHRTLRRVTVADGAVA
DRVFELLMGNDVAPRKDFIIAGAEKLDRGRIDA
NT seq 2082 nt   +upstreamnt  +downstreamnt
gtgactccgcccagccccaccccggacgacaagtacaccgcggcgaacctgctcgtcctc
gagggactcgaagccgtccgcaagcgcccgggcatgtacatcggctcgacggactcccgg
ggcctcatgcactgcctgtgggagatcatcgacaactccgtcgacgaggcgctgggcggg
cactgctcccggatcgacgtggtcctgcgccgcgacggctccgtggaggtgcgcgacgac
ggccgcggcatccccgtcgacgcggagaagcgcaccgggctgtccggggtggaggtcgtc
ttcacccacctgcacgccggcgggaagttcggcggcgggtcctactccgcctccgggggg
ctgcacggggtgggggccagcgtcgtcaacgccctgtccgcccgcctcgacgtcgaggtc
gaccgcgggggcaagacgtacgcgacgagcttccgccgcggcacccccggccgctacgcc
ggggaggggcccgacgccgacttcacccccgagaccgggctcgccgtcgtcggccgcgcc
aagcggggggtcaccgggacccgggtgcgctactgggcggaccggcagatcttcctcaag
gaggccgcgttctcctacgaggacctcgtcgcccgggcccgccagacgtccttcctggtg
ccggggctgcgcatcgtcctgcgcgacgagcgctcgggggaggcgacggaggaggtcttc
cagcacgacggcgggatcggcgagtacgccgacttcctcacccccgacgcccccgtcacc
tcggtgtggcgcctgcagggcgaggacaccttcaccgagaccgtccccgtcctcgacgac
agcgggcacatgagcccgcaggaggtcacccgcgactgcgtcgtggacatcgccctgcgc
tggggcaccggctacgacccgacggtccgctcgttcgtcaacatcatctccacccccaag
ggcgggtcgcacctgtcggggttcgagcaggggctgcacgccgcggtgaagaagcaggtg
gacgcccaggcccggcggctgaaggtgggccgggacgagaagctggagaaggacgacgtc
ctcgccgggctgacggccgtggtcaccgtgcggctggccgaaccgcagttcgagggccag
accaaggaggtcctggggaccgccgcggtgcgcgccatcgtgcgcaaggtggtggagaac
gagctcggcgcggtgttcgcctcgcccaagcgcgacgacaagcaggaggcgacggccgtg
ctggacaaggtcgtcgccgagatgaagtcacggatctccgcgcgcctgcacaaggagacc
cagcgccgcaagaacgccctggagagctcctcgctgccggcgaagctcaaggactgccgc
tccgacgacgtggacaacaccgagctgttcctcgtggagggcgactccgcgctggggacg
gcgatgggagcgcgcaactccgagtaccaggccctgctgccgctgcgcggcaagatcctc
aacgtccagaaggcgtccgtcacggacatgctgaagaacgccgagtgcgcctcgatcatc
caggtcgtgggcgggggctccgggcgcagcttcgacctgagcgcggtgcgctacggcaag
atcgtgctgatgaccgacgccgacgtcgacggcgcgcacatcaggacgctgctgctgacg
ctgttcttccgctacatgcgccccctcatcgaggccggccgggtgttcgcggccgtcccc
ccgctgcaccgcctggaggtgacccagccgggcaagaagggcaaggaggtcgtctacacg
tactccgacgccgagctgcgccgggtgaccgcggacctgaaccggcgcgggcgcagctac
cgggagccccagcgctacaaggggctgggggagatggacgaggaccagctggccgagacg
accatggagcgccagcaccgcaccctgcgccgggtgacggtggccgacggcgcggtggcc
gaccgggtcttcgagctcctcatgggcaacgacgtcgccccgcgcaaggacttcatcatc
gccggggcggagaagctggaccggggccgcatcgacgcctga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (26)   

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