KEGG   Kytococcus sedentarius: Ksed_09250
Entry
Ksed_09250        CDS       T00974                                 
Name
(GenBank) guanosine pentaphosphate synthetase I/polynucleotide phosphorylase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
kse  Kytococcus sedentarius
Pathway
kse03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kse00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Ksed_09250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kse03019]
    Ksed_09250
   03016 Transfer RNA biogenesis [BR:kse03016]
    Ksed_09250
Enzymes [BR:kse01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     Ksed_09250
Messenger RNA biogenesis [BR:kse03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Ksed_09250
Transfer RNA biogenesis [BR:kse03016]
 Prokaryotic type
  tRNA degradation factors
   Ksed_09250
SSDB
Motif
Pfam: RNase_PH PNPase S1 KH_1 RNase_PH_C KH_2 KhpA-B_KH
Other DBs
NCBI-ProteinID: ACV05971
UniProt: C7NFX1
Position
947719..950247
AA seq 842 aa
MEGPEITTAEAVIDNGAYGTRTIRFETGRLAQQAAGSVAAYLVEDDIDDATMVLSTTTAG
KEPKDHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPGTDAILTCRLIDRPLRPTFTKGL
RNEVQVVVTVLAHHPDHQYDVLAINAASASTQISGLPFSGPIGGVRISLIDGQWVAFPNF
SDIARSTFDMVVAGRLTDDGDVAIMMVEAESTESTWALVNDEGKTAPTEEVVSQGLEASK
VFIRALCEAQASLHAAAGKEVQEFPTFLDFQDDAYQAVESAAEKNTAEALTIAGKQEREG
RLDEIKDSLKADLAGADEESGKPFAGRAKEVSAAFKALQKKLIRERILRDGVRIDGRGPK
DIRALSAEVQALPRVHGSAIFERGETQIMGVTTLNMLRMEQQLDGLNPVTRKRYMHNYNF
PPYSTGETGRVGSPKRREIGHGALAERAILPVLPSREEFPYAIRQVSEALGSNGSTSMGS
VCASTLSLLNAGVPLKAPVAGIAMGLVSAQVDGGTRYQALTDILGAEDAFGDMDFKVAGT
KDFVTAIQLDTKLDGIPAEELSKALTQAREARLHILDVMSQAIDAPDEMSPNAPRVIAVK
VPVDKIGEVIGPKGKMINQIQEDTGADISIEDDGTVYIGATDGPSAEAARSAVNAIANPQ
MPEIGERFLGTVVKTTTFGAFISLLPGKDGLLHISEIRKLVGGKRIDAVEDVLNVGDKVQ
VELKEIDQRGKLSLGAVVAEDGEAAAQAPQSGKIGGGSADRGAADATSVEDDAERPAPVT
VENSITDDDALEAQEATQSAVDGEGSDSSDDSEDEGGERRRPRRRRGARGGRARGGSEGS
ED
NT seq 2529 nt   +upstreamnt  +downstreamnt
gtggagggtcctgagatcaccaccgccgaagccgtcatcgacaatggcgcctacggcacc
cgcaccatccggttcgagaccggacgcctggcacagcaggccgctggctctgtcgccgcc
tacctcgtcgaggacgacatcgacgacgccaccatggtcctgtcgaccaccaccgccggc
aaggagccgaaggaccacttcgacttcttcccgctgaccgtggacgtcgaggagcgcatg
tacgccgcgggccgcatccccggctcgttcttccggcgcgagggccgtcccggcaccgac
gccatcctgacctgccgcctgatcgaccggccgctgcgccccactttcaccaagggcctg
cgcaacgaggtccaggtcgtggtgaccgtgctcgcgcaccaccccgaccaccagtacgac
gtgctggccatcaacgccgccagcgcctccacccagatctccggtctgccgttctccggc
cccatcggtggcgtgcgcatctcgctcatcgacggccagtgggtggccttcccgaacttc
tcggacatcgcccgctcgaccttcgacatggtcgtggccggtcgcctgaccgatgacggc
gacgtcgccatcatgatggtcgaggccgagtccaccgagtccacctgggccctggtgaac
gacgagggcaagaccgcccccaccgaggaggtcgtgtcccaggggctcgaggcctccaag
gtcttcatccgcgcgctgtgcgaggcgcaggcctcgctccacgccgccgcaggcaaggag
gtgcaggagttcccgaccttcctggacttccaggacgacgcctaccaggccgtcgagtcc
gctgccgagaagaacaccgccgaggcgctgaccatcgccggcaagcaggagcgcgagggg
cgcctggacgagatcaaggactccctcaaggccgatctggcgggtgcggacgaggagtcc
ggcaagcccttcgccgggcgtgccaaggaggtctccgcggccttcaaggcgctgcagaag
aagctcatccgcgagcgcatcctgcgtgacggcgtccgcatcgacggccgtggtccgaag
gacatccgcgcgctctccgccgaggtgcaggcgctgccgcgcgtgcacggctcggccatc
ttcgagcgcggcgagacccagatcatgggtgtcaccacgctgaacatgctgcgcatggag
cagcagctggacggcctgaacccggtcacccgcaagcgctacatgcacaactacaacttc
ccgccctactccaccggtgagaccggtcgcgtcggttcgccgaagcgtcgcgagatcggc
cacggtgcgctcgccgagcgcgccatcctgccggtcctgccgagccgcgaggagttcccc
tacgcgatccgccaggtctccgaggcgctgggctccaacggctcgacctcgatggggtcg
gtctgcgcctccacgttgtcgctgctgaacgccggtgtgccgctgaaggcacccgttgcc
ggcatcgccatgggcctggtctccgcgcaggtcgacggtggcacccgctaccaggcgctg
acggacatcctcggggccgaggacgccttcggtgacatggacttcaaggtggccggcacg
aaggacttcgtgaccgccatccagctggacaccaagctcgacggcatccccgccgaggag
ctgtccaaggcgctgacccaggctcgtgaggcccgcctccacatcctggacgtcatgtcc
caggcgatcgacgccccggacgagatgagccccaacgccccgcgcgtcattgcggtgaag
gtgccggtcgacaagatcggcgaggtcatcggcccgaagggcaagatgatcaaccagatc
caggaggacaccggcgccgacatctcgatcgaggacgacggcaccgtgtacatcggcgcg
accgacggcccctcggccgaggcggcccgttcggcggtgaacgcgatcgccaacccgcag
atgccggagatcggcgagcgcttcctgggcaccgtggtgaagaccacgacgttcggtgcg
ttcatctcgctgctgccgggcaaggacggtctgctgcacatctccgagatccgcaagctc
gtcggcggcaagcgcatcgacgccgtcgaggacgtgctcaacgtgggcgacaaggtccag
gtggagctcaaggagatcgaccagcgcggcaagctgtcgctgggcgcggtcgtggccgag
gacggcgaggctgctgcgcaggctccgcagtccggcaagatcggtggcggttccgccgac
cgcggcgccgccgacgcgacctccgtggaggacgacgccgagcggccggccccggtgacc
gtggagaactccatcaccgacgacgacgcgctggaggcccaggaggccacccagtcggcg
gtcgacggtgagggctccgactcctccgacgactccgaggacgagggcggcgagcgtcgt
cgtccgcgccgccgtcggggcgcccgtggtgggcgtgcccgtggcgggtccgagggttcc
gaggactga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (28)   

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