KEGG   Leptospira tipperaryensis: A0128_03505
Entry
A0128_03505       CDS       T04558                                 
Name
(GenBank) DNA-formamidopyrimidine glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
laj  Leptospira tipperaryensis
Pathway
laj03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:laj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    A0128_03505
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:laj03400]
    A0128_03505
Enzymes [BR:laj01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     A0128_03505
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     A0128_03505
DNA repair and recombination proteins [BR:laj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     A0128_03505
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS zinc-ribbons_6 NFACT_N Auto_anti-p27 Cys_rich_KTR DZR Zn_Tnp_IS91 Prok-RING_1 OrfB_Zn_ribbon
Other DBs
NCBI-ProteinID: AOP33011
UniProt: A0A1D7UTV6
Position
1:complement(719232..720062)
AA seq 276 aa
MPELPDLVIIQERLIPELIDRKIESIEVVDPIVVRDLTGGALETAFKGAVFQKIERHGPF
LNFAFEKMNIVIHPMLSGRFSLDPKYKRKDLCIRFNTDGPVLNYMDDTRMGKVYFLKPEE
LGQIPKYKEQGVDLLSEEFTESLFLKLMDKSRKQTRVFLMDQTKLSALGNAYADEVLFAA
KIHPKTPCNQLAPEDKSLLYKSIKEVLFTSIDYIRKKNAPLEVKVRDHVKVRNRKNEPCP
VCGTTIRRANVLGYDSFFCPNCQQSKGQQFIDWGNV
NT seq 831 nt   +upstreamnt  +downstreamnt
atgcccgaactcccggatctagtcatcattcaagaaagactcattcccgagttgatcgat
cgaaaaatcgaatccatcgaggtcgtcgatccgatcgtagtccgcgatcttaccggcgga
gccttggaaaccgcattcaagggtgccgttttccaaaaaatagaaagacacggacccttt
ctcaacttcgcattcgaaaaaatgaatatagtcattcatccgatgttatccggtcgattt
tccctggatccaaaatacaaacgaaaggatctttgtattcggtttaatacggacggtccc
gtcctgaattatatggacgacacgagaatgggaaaggtctattttttgaagccggaagaa
ttgggacaaattccaaaatacaaagagcaaggagtcgatcttctctccgaagaatttacg
gaatcactctttctaaagctgatggacaaaagtcgaaaacagaccagagtctttttgatg
gatcagaccaaactgagtgcattaggaaatgcttatgcggacgaagtccttttcgctgca
aaaattcatccgaaaactccctgcaatcaactcgcaccggaagataaatccctactctac
aaaagtatcaaagaagttcttttcacttcgatcgattatattcgaaagaaaaacgcgcct
ttagaagtgaaagttcgcgaccacgttaaagtcagaaatcgtaaaaacgaaccctgcccc
gtttgtggaactacgattcgaagggcaaacgtcttaggttatgattctttcttttgtcca
aactgccaacaatcaaaaggacaacagtttatcgactggggaaacgtttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (28)   

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