KEGG   Lacinutrix sp. 5H-3-7-4: Lacal_2857
Entry
Lacal_2857        CDS       T01533                                 
Name
(GenBank) UvrD/REP helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
lan  Lacinutrix sp. 5H-3-7-4
Pathway
lan03420  Nucleotide excision repair
lan03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Lacal_2857
   03430 Mismatch repair
    Lacal_2857
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lan03400]
    Lacal_2857
Enzymes [BR:lan01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Lacal_2857
DNA repair and recombination proteins [BR:lan03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Lacal_2857
   MMR (mismatch excision repair)
    Other MMR factors
     Lacal_2857
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor Viral_helicase1 AAA_30 ResIII DEAD AAA_11 PAX
Other DBs
NCBI-ProteinID: AEH02695
UniProt: F6GD45
Position
complement(3172352..3174691)
AA seq 779 aa
MEKYLSQLNEAQLAPTIQKDGPMIVIAGAGSGKTRVLTYRIAYLMNQGVDSFNILALTFT
NKAAKEMKGRIAEIVGDGEAKNLWMGTFHSVFAKILRFEGHHLGFPSNFTIYDTQDSQKL
LGSIIKEMGLEKDVYKTKQVYSRISSYKNSLITVKAYFKNPELMEADAMARRPKMGEIYA
EYVNRCFKAGAMDFDDLLLRTNELLTRFPAVLAKYQDKFRYILVDEYQDTNHSQYLIVRA
LADRFQNICVVGDDAQSIYAFRGANINNILNFQKDYDNVKLYRLEQNYRSTKNIVGAANS
VIDHNQTKLDKVVWTANDDGPKVKVNRSLTDGDEGRFVASTIWEEKMNNQLQNSDFAVLY
RTNAQSRAIEDALRKRDIPYRIYGGLSFYQRKEIKDVTAYLRLVLNTSDEEALKRVINYP
ARGIGQTTIDRLIVAANATGKTIFEVLKEIDSIKININGGTRNKLKDFVTLIESYQVMNQ
TANAFDLAEHITKSSGLIREFNKDGTPEGVLRLENVEELLNGIKDFVEGQIEVADSTGNL
AEFLEDVALATDLDGDKGDPNHVALMTIHLAKGLEFNHVFIVGLEEDLFPSAMSMNTRSE
LEEERRLFYVALTRAEKQAYLTYALSRYRWGKLIDSEPSRFIEEIDDKFLDITTPIEERR
INPMLSQDIFGDVEPNKIRFKKPVQPKFKKKTTAKKEPENFKLSVPKKLKKVEKAMVADN
TNLFDSELAVGNIVSHLRFGKGEVIKIEGKGSDIKAEIKFDVGGSKKLLLRFAKLNIIG
NT seq 2340 nt   +upstreamnt  +downstreamnt
ttggaaaagtatttaagccaattaaacgaagcgcaattagcgccaaccatccaaaaagat
ggccctatgattgttattgcaggagcaggttctggtaagacgagagtattaacatatcgt
attgcttatttaatgaatcaaggtgtagactcgtttaatattttagcattaacatttact
aataaagcagcaaaggaaatgaaaggcagaattgccgaaattgttggtgatggtgaagct
aaaaatttatggatgggaacatttcactctgtttttgctaaaattttgcgtttcgaaggt
caccatttaggatttccaagtaattttacaatttacgacacacaagactctcaaaagctt
ttaggttctattataaaagaaatgggactagaaaaagacgtttataaaacaaagcaagtt
tatagtagaatttcttcatacaaaaacagtttaataactgtaaaagcatattttaaaaac
ccagagttaatggaggcagatgctatggcacgaagaccaaaaatgggagaaatatatgca
gaatatgtaaaccgttgttttaaagcaggagcaatggattttgatgatttattattaaga
actaacgagttgttaacgcgttttccagctgttttagcaaaataccaagataagtttcgt
tacatattggtagatgagtatcaagatacaaaccattcacaatatttaatagttagagca
ttagcagatcgttttcaaaatatatgtgtagttggtgatgatgcacaaagtatatacgca
ttccgtggagcaaatattaataacatattaaatttccagaaagattacgacaatgtaaaa
ctataccgtttagagcaaaattatagatcaacaaaaaatattgttggagcagcaaactca
gtaatagatcacaaccaaacaaaattagataaagttgtttggaccgcaaatgatgatgga
ccaaaagtaaaagtaaatcgctcactaacagatggagatgaaggtcgatttgtagcaagt
actatttgggaagaaaaaatgaataaccaattgcaaaacagtgattttgcagttttatat
agaaccaatgcacaatctcgtgcaattgaagatgccttacgtaaaagagatataccatat
agaatttacggtggtctttcattttaccaacgtaaagagataaaagatgttacggcttac
ctgcgtttagttttaaatacatcagatgaggaagctttaaaacgtgttattaattatcca
gcaagaggtattggacaaacaacaatagataggttaatagttgctgcaaatgcaaccggt
aaaactatttttgaagttttaaaagaaatagattctataaaaattaatataaatggagga
acacgaaacaaattaaaagatttcgtaactctaattgaaagctatcaagtaatgaatcaa
acggcaaatgctttcgaccttgccgaacatattacaaaaagtagtggtttaataagagaa
tttaataaagatggtactccagaaggtgttttaagacttgaaaatgttgaagaactctta
aacggtattaaagattttgttgaaggacaaatagaagtagcagattctacaggtaattta
gccgaatttttagaagatgttgcacttgcaacagatttagacggtgataaaggtgatcca
aaccatgtcgctttaatgacaattcacttagcaaaaggactagaatttaaccatgtgttt
atagttggtttagaagaagatttgtttccaagtgcaatgagtatgaatacacgtagcgaa
cttgaagaagaacgtagattgttttatgtggctttaacaagagccgaaaaacaagcctat
ttaacctatgcgctatcaagataccgttggggaaaattaatagattctgaacctagtaga
tttattgaagaaatagacgataaatttttagatataaccactccaattgaagaaagacga
ataaacccaatgctttctcaagatatatttggagatgtagaacctaataaaataagattt
aaaaaaccggtacagccaaaatttaagaagaaaactacagccaaaaaagaaccagaaaac
tttaaattaagtgtcccaaaaaagcttaaaaaagtagaaaaggctatggttgcagataat
actaacttatttgatagcgaattagcggtaggaaatattgttagtcacctacgatttgga
aaaggagaagtaattaaaatagaaggaaaaggaagcgatattaaagctgaaattaaattt
gatgttggcggaagtaaaaagttactattacgcttcgctaaacttaatataattggttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (48)   

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