KEGG   Lupinus angustifolius (narrow-leaved blue lupine): 109350841
Entry
109350841         CDS       T04664                                 
Name
(RefSeq) probable CCR4-associated factor 1 homolog 9
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
lang  Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lang00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109350841
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lang03019]
    109350841
Messenger RNA biogenesis [BR:lang03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     109350841
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     109350841
SSDB
Motif
Pfam: CAF1 RNase_H_2
Other DBs
NCBI-GeneID: 109350841
NCBI-ProteinID: XP_019447695
UniProt: A0A4P1REZ8
Position
LG06:29710382..29711352
AA seq 281 aa
MSVLKDEPNLNPIVIREVWASNLQSEFNLIRDVIDRYPFISMDTEFPGVIFRPPLGSSFS
HLHPSDHYSLLKSNVDSLNLIQVGLTLSDADGNLPDLGTAANRFIWEFNFRDFDVARDPH
APDSIDLLRRQGIDFCRNVDDGVDSAEFAELMMSSGLVCNDEVSWVTFHSAYDFAYLMKV
LTRRALPSGLKEFLKMMKVFFGNNIYDIKHMTRFCENTLYGGLDRVAKTLNVNRAVGKSH
QAGSDSLLTWHSFQKMRDMYFLNDGAQKHAGVLFGLEVSLM
NT seq 846 nt   +upstreamnt  +downstreamnt
atgtctgtgttgaaagacgaacctaatttgaacccgattgtgatccgtgaggtttgggct
tcaaaccttcaatctgaattcaacctcatccgtgacgtcatcgaccgttatccattcatt
tcaatggatacggaattccccggcgttattttccgtccaccgcttggatcttccttcagc
caccttcacccctccgatcactatagcttactcaagtccaacgttgattccctcaacctc
atccaggtcggtctcactctctccgacgccgacggtaatctaccggatctcggcaccgcc
gcgaaccgcttcatatgggagttcaacttccgtgactttgatgtagcgcgtgacccccac
gctcctgactcgatcgaccttcttcgccgccaggggattgacttctgccgtaacgtcgac
gacggcgttgactcggcggagttcgcggagctgatgatgtcgtcggggcttgtgtgcaac
gatgaggtgagttgggtaacgtttcacagcgcgtatgatttcgcgtacttgatgaaggtt
ttaactcgacgcgctttgccgagtgggttgaaggagtttctgaaaatgatgaaggtgttt
ttcggaaacaacatatatgacattaaacacatgacgcggttttgtgagaatacattgtat
ggcggtttggaccgggttgcgaaaacgctcaatgtgaaccgggcggttggaaagtctcat
caagccggctctgatagcttgttgacgtggcattcatttcagaaaatgagggacatgtat
tttcttaacgatggggcccagaaacatgctggggtattgtttggattagaagtatctctt
atgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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