KEGG   Lupinus angustifolius (narrow-leaved blue lupine): 109353743
Entry
109353743         CDS       T04664                                 
Name
(RefSeq) cell division cycle protein 48 homolog
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
lang  Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:lang00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    109353743
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lang03019]
    109353743
   03009 Ribosome biogenesis [BR:lang03009]
    109353743
   04131 Membrane trafficking [BR:lang04131]
    109353743
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lang04147]
    109353743
Messenger RNA biogenesis [BR:lang03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     109353743
Ribosome biogenesis [BR:lang03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    109353743
Membrane trafficking [BR:lang04131]
 SNARE
  SNARE associated proteins
   Others
    109353743
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    109353743
Exosome [BR:lang04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109353743
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_2 AAA_2 AAA_16 RuvB_N AAA_22 AAA_5 AAA_14 Vps4_C AAA_33 TIP49 AAA_18 AAA_17 ATPase_2 CDC48_N nSTAND3 Mg_chelatase AAA_24 AAA_28 Zeta_toxin IstB_IS21 RNA_helicase Zot Sigma54_activat
Other DBs
NCBI-GeneID: 109353743
NCBI-ProteinID: XP_019451653
Position
LG08:23471142..23474584
AA seq 696 aa
MNKVVRSNLRVLLGDVVSVHQCPDVKYGEHVHILPLDDTIEGVTGNLFDTYLKPYFMDAY
RPVRKGDLFLVRGGMRSIEFKVIETLPGEYCVVAPDTEIYCEGDPVKRENEERLGEVGYD
DVGGVRRQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGA
FFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRI
VSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIH
TKNMKLSDDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNS
MAVSNEHFQTALGTSNPSALRETVVEVPNVSWQDIGGLENVKRELQESSSMVHPDAAKLC
WPKQLLMNVSQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ
RGSSGGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSELLRPGRLDQLIYI
PLPDEGSRYQIFKACMRKSPISKDVDLSALAKYTQGFSGADITEICQRACKYAIRENIEK
DIERERKSAANPEAMDEDIDDDVSKIKATHFEESMKYARRSVSDADIRKYQAFAQTLQQS
RGFGTEFRFPETGGRTNGTDPFATSAAGVDEDDLYS
NT seq 2091 nt   +upstreamnt  +downstreamnt
atgaacaaagttgttaggtcaaatttgagggttcttcttggagatgttgtgtctgtgcac
caatgcccagatgtcaagtatggggagcatgtgcacattctgcctcttgatgataccatt
gaaggtgtcactggcaatctttttgacacttacttgaaaccttatttcatggatgcttat
cgtccggtcagaaagggagatctatttctcgtccgaggagggatgagaagcatagagttc
aaggtcatagaaactttacctggggaatattgtgtggttgctccagacactgaaatctac
tgtgagggggatcctgtgaaaagggagaatgaggagaggttgggtgaagttggttatgat
gatgtcggtggtgtgaggaggcaaatggcacagatccgtgagttggtggagcttccattg
aggcatccacaacttttcaagtcaattggtgtgaaaccacccaaaggaattttgctgtat
ggacccccaggttctggtaagacattaattgcaagagcagttgctaatgaaactggtgct
ttcttcttttgtattaatggaccagagattatgtccaaactggctggagagagtgaaagt
aatcttaggaaagcattcgaagaagctgaaaagaatgctccatccatcatttttattgat
gagatcgattctattgctcccaagagagaaaagacaaatggtgaagttgaaaggaggatt
gtttctcaacttttgactcttatggatggattaaaatcccgtgctcatgttattgttatt
ggtgctacgaatcgtccaaatagcattgacccagcattgagaaggtttggcagatttgat
agggagattgatattggtgttcctgatgaagttgggcgacttgaagtacttcgcatacat
accaaaaacatgaagctttctgatgatgttgatttagagagaatttcaaaagatactcat
gggtatgttggtgcggaccttgctgccctttgcactgaagctgccctgcaatgcattagg
gaaaagatggatgtaattgatttggaagacgaaaccattgatgctgaaatactgaattct
atggcagtttcaaatgagcatttccagacagctctaggaacaagcaatccatcagcttta
cgtgaaactgttgttgaggtgcctaatgttagttggcaagatattggagggcttgagaat
gtcaagcgtgagctgcaagagtcctcttctatggtccacccggatgcggcaaaactttgt
tggccaaagcaattgctaatgaatgtcagtcaagctaacttcatcagtgtgaaaggtcct
gaattacttaccatgtggtttggtgaaagtgaagccaatgttcgagaaatatttgacaag
gctagacaatcggctccgtgtgtcctcttctttgatgagcttgactccattgccactcag
agaggaagtagtggtggggatgctggtggtgctgctgatagagttctgaaccagcttctg
actgaaatggacggcatgaatgcaaaaaagactgtgttcataattggggcaaccaataga
cctgacatcattgattcggaacttcttcggccaggccgtttggaccaattgatctatatt
cctcttcctgatgaggggtcacgttatcaaatcttcaaggcctgcatgaggaagtcacct
atctcgaaagatgttgatttgagcgcgctagctaagtatactcaaggcttcagtggtgct
gatataacagagatatgtcaacgagcttgcaaatatgctattagagaaaacatagaaaag
gacatagagcgagagaggaagagcgcggcaaatcccgaggctatggatgaagacattgat
gatgatgtttccaagatcaaggctactcattttgaagagtcaatgaagtacgcacgtagg
agtgtgagtgatgccgatatacgcaaatatcaggcatttgctcagaccctacagcaatca
agggggttcggcactgaatttcggtttccagagaccggaggtaggactaatggaactgat
ccctttgcaacttctgctgctggggttgatgaagatgatttgtatagttag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (25)   
   Pfam (25)   
All databases (40)   

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